RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 PIGGQ5H8A4 983 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 GPR139Q6DWJ6 353 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 C6orf89Q6UWU4 347 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 BEND4Q6ZU67 534 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF572Q7Z3I7 529 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 PDZD9Q8IXQ8 264 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 CPNE2Q96FN4 548 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 PHPT1Q9NRX4 125 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 P2RX2Q9UBL9 471 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ADAMTS13Q76LX8 1427 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF670-ZNF695F2Z2N8 137 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 IFNA17P01571 189 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 CHRNA4P43681 627 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 CTBP2P56545 445 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 NKX6-1P78426 367 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 CDK10Q15131 360 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 KIAA0930Q6ICG6 404 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 NAPRTQ6XQN6 538 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 SPATC1Q76KD6 591 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 OR7D4Q8NG98 312 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 TRUB1Q8WWH5 349 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 C3orf49Q96BT1 292 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 PYCR2Q96C36 320 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 OR51I1Q9H343 314 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 RHCGQ9UBD6 479 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 SRRDQ9UH36 339 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 STXBP5LQ9Y2K9 1186 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 BORCS7-ASMTA0A0B4J1R7 106 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 B8ZZF3 427 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 VIPP01282 170 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 OR4Q2P0C623 313 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 SLC13A2Q13183 592 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 FAM182AQ5T1J6 154 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM151AQ8N4L1 468 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 TCEANCQ8N8B7 351 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 MAF1Q9H063 256 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 BAZ2BQ9UIF8 2168 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF16P17020 682 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 LSAMPQ13449 338 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 PAQR3Q6TCH7 311 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 FAM83HQ6ZRV2 1179 aaPredicted RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 FAM46DQ8NEK8 389 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 DEDD2Q8WXF8 326 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 SLC5A7Q9GZV3 580 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 ERVK-18Q9QC07 812 aa14.44□□□□□ -0.1
SCN3B-201ENST00000299333 FCF1Q9Y324 198 aaKnown RBP14.44□□□□□ -0.1
SCN3B-201ENST00000299333 PROM1O43490 865 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ITGA5P08648 1049 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 H2AFB2P0C5Z0 115 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 PET100P0DJ07 73 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 CKMT1AP12532 417 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 C1QTNF8P60827 252 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 COTL1Q14019 142 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 LIPKQ5VXJ0 399 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 BORAQ6PGQ7 559 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 OR5T2Q8NGG2 359 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 PSMG2Q969U7 264 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 RAD9AQ99638 391 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 SPATA9Q9BWV2 254 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCN3B-201ENST00000299333 DTLQ9NZJ0 730 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 NOCTQ9UK39 431 aaKnown RBP14.43□□□□□ -0.1
SCN3B-201ENST00000299333 CDH10Q9Y6N8 788 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 COLEC10Q9Y6Z7 277 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 A0A0J9YVX5 310 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 FLRT2O43155 660 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 UBXN7O94888 489 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 GTF2F2P13984 249 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ITGB5P18084 799 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ADH7P40394 386 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ERVK-25P63136 954 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ST3GAL4Q11206 333 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 DUOXA1Q1HG43 343 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM220Q6QAJ8 160 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 RHBDF1Q96CC6 855 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 PRICKLE1Q96MT3 831 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-201ENST00000299333 FBRSQ9HAH7 460 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM39AQ9NV64 488 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 FZD10Q9ULW2 581 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ZFP37Q9Y6Q3 630 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-201ENST00000299333 EVI2BP34910 448 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 PBX3P40426 434 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 MAGEB1P43366 347 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 SULT2A1Q06520 285 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 FBXO15Q8NCQ5 510 aaPredicted RBP14.43□□□□□ -0.1
SCN3B-201ENST00000299333 STK35Q8TDR2 534 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 BIRC8Q96P09 236 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 TGIF2Q9GZN2 237 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 MTG2Q9H4K7 406 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 TMEM45AQ9NWC5 275 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 FZD1Q9UP38 647 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 DLX3O60479 287 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 B4GALT4O60513 344 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 GNRH1P01148 92 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 MLLT10P55197 1068 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 FADDQ13158 208 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF529Q6P280 563 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 SLC36A4Q6YBV0 504 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 DPF1Q92782 380 aa14.43□□□□□ -0.1
SCN3B-201ENST00000299333 ZNF558Q96NG5 402 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms