RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 INSIG1O15503 277 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 DLX3O60479 287 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 C7P10643 843 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 AMD1P17707 334 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC7A9P82251 487 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CD83Q01151 205 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF45Q02386 682 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 COL19A1Q14993 1142 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 CPNE8Q86YQ8 564 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 KLHL36Q8N4N3 616 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR10H4Q8NGA5 316 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 ASB16Q96NS5 453 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 FERD3LQ96RJ6 166 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 THUMPD1Q9NXG2 353 aaKnown RBP11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 SIRPGQ9P1W8 387 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 DEC1Q9P2X7 70 aa11.49□□□□□ -0.57
SYNGAP1-201ENST00000293748 TCRBV7S3A2A0A539 114 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 DAPL1A0PJW8 107 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 NPPAP01160 153 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ASGR2P07307 311 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GNAZP19086 355 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 VARSP26640 1264 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CSTF1Q05048 431 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TARDBPQ13148 414 aaKnown RBP eCLIP11.48□□□□□ -0.571e-6■■■■□ 23.6
SYNGAP1-201ENST00000293748 SERPINA9Q86WD7 417 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CACUL1Q86Y37 369 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 FNDC8Q8TC99 324 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 DNAJA4Q8WW22 397 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 RNF38Q9H0F5 515 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 DPAGT1Q9H3H5 408 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SEC14L4Q9UDX3 406 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 MGAT4AQ9UM21 535 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ANXA2P2A6NMY6 339 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TYROBPO43914 113 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ANXA2P07355 339 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 HTR1BP28222 390 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 RBBP4Q09028 425 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TAF1AQ15573 450 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF423Q2M1K9 1284 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GAREM2Q75VX8 874 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 LINGO2Q7L985 606 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CHST4Q8NCG5 386 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 HDAC2Q92769 488 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CLIP3Q96DZ5 547 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 AHCYL2Q96HN2 611 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF641Q96N77 438 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GPER1Q99527 375 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GPR22Q99680 433 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 MAPKAP1Q9BPZ7 522 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CHIAQ9BZP6 476 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 COMMD4Q9H0A8 199 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 RPF2Q9H7B2 306 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TCF7L1Q9HCS4 588 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SH3PXD2BA1X283 911 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CPSF4LA6NMK7 179 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TRIM3O75382 744 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 KDM4BO94953 1096 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 PRAMEF12O95522 483 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SRPRAP08240 638 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CHRM5P08912 532 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 MYCLP1P12525 358 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 VIPR2P41587 438 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GNG2P59768 71 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 LSAMPQ13449 338 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 MBLAC2Q68D91 279 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CYP2U1Q7Z449 544 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CLIP4Q8N3C7 705 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 LINC00471Q8N535 108 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 KIAA1958Q8N8K9 716 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR6K2Q8NGY2 324 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 NDRG1Q92597 394 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 PIGKQ92643 395 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ITPKCQ96DU7 683 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 PKMYT1Q99640 499 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC46A2Q9BY10 475 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 FAM83DQ9H4H8 585 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 FKBPLQ9UIM3 349 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 NDRG2Q9UN36 371 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 A0A1B0GVM2 712 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 H0YAE9 185 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 IL1BP01584 269 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 HMGA1P17096 107 aaKnown RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GSTM3P21266 225 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TGFBIQ15582 683 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 IRAK1BP1Q5VVH5 260 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SNX20Q7Z614 316 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 PLCZ1Q86YW0 608 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SAMD14Q8IZD0 417 aaPredicted RBP11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TOMM5Q8N4H5 51 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 KAT2AQ92830 837 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 FATE1Q969F0 183 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC45A3Q96JT2 553 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 BIRC8Q96P09 236 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 EBPLQ9BY08 206 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZDHHC2Q9UIJ5 367 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CA14Q9ULX7 337 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms