RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 OR3A2P47893 321 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 MSS51Q4VC12 460 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 SLC39A5Q6ZMH5 540 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ADGRD2Q7Z7M1 963 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 NAT14Q8WUY8 206 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ZDHHC12Q96GR4 267 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 GPR22Q99680 433 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 AMBNQ9NP70 447 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 TEX264Q9Y6I9 313 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 H7BY64 318 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 G6PDP11413 515 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 ECHS1P30084 290 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 C1orf61Q13536 156 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 SPATC1Q76KD6 591 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 TICAM1Q8IUC6 712 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 PLEKHO2Q8TD55 490 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 PRAP1Q96NZ9 151 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 RC3H2Q9HBD1 1191 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 FAM170BA6NMN3 283 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 AKAP8O43823 692 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 OR1I1O60431 355 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 SHMT2P34897 504 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 RPL26P61254 145 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 NOXRED1Q6NXP6 359 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 PNPLA2Q96AD5 504 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 FANCFQ9NPI8 374 aa16.76■□□□□ 0.27
SHANK1-201ENST00000293441 FAM208AQ9UK61 1670 aaKnown RBP16.76■□□□□ 0.27
SHANK1-201ENST00000293441 VSTM5A8MXK1 200 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF267Q14586 743 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 PLEKHG6Q3KR16 790 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ABCA11PQ4W5N1 156 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 RNF220Q5VTB9 566 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 OR2M4Q96R27 311 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ACSL5Q9ULC5 683 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 TTC34A8MYJ7 566 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 PRKD3O94806 890 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 EBLN1P0CF75 366 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 BMP8BP34820 402 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 AGTR2P50052 363 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ARFRP1Q13795 201 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 C1orf94Q6P1W5 598 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 BMP8AQ7Z5Y6 402 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 TMCO2Q7Z6W1 182 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 SERINC5Q86VE9 423 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 OR10Q1Q8NGQ4 319 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 DNAJA4Q8WW22 397 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 OR6C74A6NCV1 312 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 AREL1O15033 823 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 LAMTOR5O43504 91 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 BEST1O76090 585 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 CSTF1Q05048 431 aaKnown RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 LASP1Q14847 261 aaKnown RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 C2CD4AQ8NCU7 369 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 C1orf74Q96LT6 269 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 TGM7Q96PF1 710 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 MYOCOSA0A1B0GUC4 107 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 AGPSO00116 658 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 SOCS5O75159 536 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 RFPL2O75678 378 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 TGFBIQ15582 683 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 HSDL2Q6YN16 418 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 OTUB2Q96DC9 234 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF99A8MXY4 864 aaPredicted RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 GSTT2BP0CG30 244 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 CAPZA1P52907 286 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 PITPNAQ00169 270 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 PQLC3Q8N755 202 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 GLIS1Q8NBF1 620 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 SCAMP4Q969E2 229 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 LCHNA4D1U4 455 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ITGA10O75578 1167 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 GPX6P59796 221 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 TIGD6Q17RP2 521 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 SMYD5Q6GMV2 418 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 ZNF613Q6PF04 617 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 OR6N1Q8NGY5 312 aa16.75■□□□□ 0.27
SHANK1-201ENST00000293441 CNDP2Q96KP4 475 aaKnown RBP16.75■□□□□ 0.27
SHANK1-201ENST00000293441 A0A1B0GVT2 93 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 FABP12A6NFH5 140 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 SCN1BQ07699 218 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 PLEKHS1Q5SXH7 462 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 GPALPP1Q8IXQ4 340 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 ZSCAN1Q8NBB4 408 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 EZH1Q92800 747 aaPredicted RBP16.74■□□□□ 0.27
SHANK1-201ENST00000293441 HCN2Q9UL51 889 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 MGAT4AQ9UM21 535 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 MAU2Q9Y6X3 613 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 USP43Q70EL4 1123 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 KIAA1191Q96A73 305 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 PAAF1Q9BRP4 392 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 ACTL8Q9H568 366 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 PRTFDC1Q9NRG1 225 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 H3BNX3 289 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 RCBTB2O95199 551 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 HOXD13P35453 343 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 MTTPP55157 894 aa16.74■□□□□ 0.27
SHANK1-201ENST00000293441 ODF4Q2M2E3 257 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms