RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC45A3Q96JT2 553 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM83CQ9BQN1 747 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CPNE5Q9HCH3 593 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 DTLQ9NZJ0 730 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CD84Q9UIB8 345 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 TUBGCP6Q96RT7 1819 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 IRGMA1A4Y4 181 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 A8MU76 341 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 PRAMEF11O60813 436 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 AP2S1P53680 142 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 GPRIN1Q7Z2K8 1008 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 VANGL1Q8TAA9 524 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 ZUFSPQ96AP4 578 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SPIN1Q9Y657 262 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 MYCLP1P12525 358 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 BMP7P18075 431 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 C5AR1P21730 350 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 MAP2K4P45985 399 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 ANKDD1AQ495B1 522 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 FAM92BQ6ZTR7 304 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 PIWIL3Q7Z3Z3 882 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 UBALD2Q8IYN6 164 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CMASQ8NFW8 434 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 FIBINQ8TAL6 211 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 LMO3Q8TAP4 145 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 TMEM174Q8WUU8 243 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SLC32A1Q9H598 525 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 POLR3BQ9NW08 1133 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 NUMBLQ9Y6R0 609 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 H0YAE9 185 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SOCS2O14508 198 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SGTAO43765 313 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 ACVRL1P37023 503 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CLCN4P51793 760 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 NDUFA9Q16795 377 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 GPR33Q49SQ1 333 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 IQCCQ4KMZ1 466 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 DUS1LQ6P1R4 473 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 ADGRD2Q7Z7M1 963 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CPXM2Q8N436 756 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 PIWIL1Q96J94 861 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CGREF1Q99674 301 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 RAB11FIP5Q9BXF6 653 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 IPPKQ9H8X2 491 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CARS2Q9HA77 564 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 FBRSL1Q9HCM7 1045 aaKnown RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 CCM2LQ9NUG4 571 aaPredicted RBP11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SIT1Q9Y3P8 196 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 KCNE2Q9Y6J6 123 aa11.03□□□□□ -0.64
NPC1L1-201ENST00000289547 SOCS5O75159 536 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 ALPIP09923 528 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 NUDT1P36639 197 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 MTAPQ13126 283 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 MBTPS1Q14703 1052 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 TIFABQ6ZNK6 161 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 TTC9BQ8N6N2 239 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 KCNC2Q96PR1 638 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 WACQ9BTA9 647 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 MAN2B2Q9Y2E5 1009 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 MYH7BA7E2Y1 1941 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 LCHNA4D1U4 455 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 ANKRD33BA6NCL7 494 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 CHST10O43529 356 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 SNRPD2P62316 118 aaKnown RBP11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 MRPS21P82921 87 aaKnown RBP11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 EFR3AQ14156 821 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 MLF2Q15773 248 aaPredicted RBP11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 HSD17B12Q53GQ0 312 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 IDNKQ5T6J7 187 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 BORAQ6PGQ7 559 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 CYP20A1Q6UW02 462 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 NRSN1Q8IZ57 195 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 C11orf65Q8NCR3 313 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 GPR21Q99679 349 aa11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 EIF2B3Q9NR50 452 aaKnown RBP11.02□□□□□ -0.64
NPC1L1-201ENST00000289547 ZNF487B1APH4 448 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 PLOD2O00469 737 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 AXIN1O15169 862 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 NUAK1O60285 661 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 SIX3O95343 332 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 MT-CYBP00156 380 aaPredicted RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 TRBC1P01850 177 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 EDN1P05305 212 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 PPP2R2BQ00005 443 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 CDKL1Q00532 357 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 CPTPQ5TA50 214 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 GPR174Q9BXC1 333 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 CNOT11Q9UKZ1 510 aaKnown RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 MAB21L2Q9Y586 359 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 CLCA3PQ9Y6N3 262 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 MYH9P35579 1960 aaKnown RBP11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 A8MT66 165 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 INMT-MINDY4F8WBC2 141 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 ABLIM3O94929 683 aa11.02□□□□□ -0.65
NPC1L1-201ENST00000289547 ECDO95905 644 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms