RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HIST1H2AJQ99878 128 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 RHOXF2Q9BQY4 288 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 HAUS8Q9BT25 410 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 H2AFJQ9BTM1 129 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 UNKQ9C0B0 810 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 UTP6Q9NYH9 597 aaKnown RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CTNNAL1Q9UBT7 734 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF490Q9ULM2 529 aaPredicted RBP8.72□□□□□ -1.01
HMGN1-201ENST00000288344 SRPK3Q9UPE1 567 aa8.72□□□□□ -1.01
HMGN1-201ENST00000288344 CNTRLQ7Z7A1 2325 aa8.71□□□□□ -1.01
HMGN1-201ENST00000288344 A0A1B0GX78 115 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 TRBC2A0A5B9 178 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 FEZF1A0PJY2 475 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 DNAJB6O75190 326 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 KLHL2O95198 593 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 CCNDBP1O95273 360 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 ANXA5P08758 320 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 LTA4HP09960 611 aaKnown RBP8.71□□□□□ -1.02
HMGN1-201ENST00000288344 CDH1P12830 882 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 CD22P20273 847 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 MAPK1P28482 360 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 OR1D4P47884 311 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 RNF144AP50876 292 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-201ENST00000288344 SOX8P57073 446 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 RPS15AP62244 130 aaKnown RBP8.71□□□□□ -1.02
HMGN1-201ENST00000288344 MC1RQ01726 317 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 BMPR2Q13873 1038 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 ERV3-1Q14264 604 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 CSHL1Q14406 222 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 SLC29A2Q14542 456 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 SSPNQ14714 243 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 RASA2Q15283 850 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 NKG7Q16617 165 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 C1orf189Q5VU69 101 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 SULT1C3Q6IMI6 304 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 PRMT9Q6P2P2 845 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 NXPE4Q6UWF7 544 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 TTLL10Q6ZVT0 673 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 VN1R5Q7Z5H4 357 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 C17orf64Q86WR6 236 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 PDSS2Q86YH6 399 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 ALDH16A1Q8IZ83 802 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 OR2Y1Q8NGV0 311 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 KCTD4Q8WVF5 259 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 ESAMQ96AP7 390 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 KIAA1143Q96AT1 154 aaPredicted RBP8.71□□□□□ -1.02
HMGN1-201ENST00000288344 FKBP10Q96AY3 582 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 NACC2Q96BF6 587 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 MOCOSQ96EN8 888 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 MVB12AQ96EY5 273 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 PAFAH2Q99487 392 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 MESP1Q9BRJ9 268 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 TRIM54Q9BYV2 358 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 TGIF2Q9GZN2 237 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 NT5DC2Q9H857 520 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 WDR54Q9H977 334 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 GEMIN8Q9NWZ8 242 aaKnown RBP8.71□□□□□ -1.02
HMGN1-201ENST00000288344 ACOT9Q9Y305 439 aa8.71□□□□□ -1.02
HMGN1-201ENST00000288344 A0A087WUV0 522 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 A0A096LPK6 155 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 K7EM74 188 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 KERAO60938 352 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF16P17020 682 aaPredicted RBP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TFEBP19484 476 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 PHBP35232 272 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 AHRP35869 848 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 EIF1AXP47813 144 aaKnown RBP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 PMS2P54278 862 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 RPS15P62841 145 aaKnown RBP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 REEP5Q00765 189 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TAGLNQ01995 201 aaKnown RBP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 SLC9A5Q14940 896 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 ACAP2Q15057 778 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 ADPRMQ3LIE5 342 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 ATG9BQ674R7 924 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 PRSS41Q7RTY9 318 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 PPP1R32Q7Z5V6 425 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 GPSM1Q86YR5 675 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 ZNF843Q8N446 348 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 CSNK1A1LQ8N752 337 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 KCT2Q8NC54 265 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 STAG3L4Q8TBR4 150 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 NT5CQ8TCD5 201 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 UBTD2Q8WUN7 234 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 SLC5A11Q8WWX8 675 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 THAP4Q8WY91 577 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.7□□□□□ -1.02
HMGN1-201ENST00000288344 MED8Q96G25 268 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 MACROD1Q9BQ69 325 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 NDC1Q9BTX1 674 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TRIM55Q9BYV6 548 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 CD244Q9BZW8 370 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 EHD1Q9H4M9 534 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 PELI2Q9HAT8 420 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 NMRAL1Q9HBL8 299 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 GPRC5BQ9NZH0 403 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TXNDC16Q9P2K2 825 aa8.7□□□□□ -1.02
HMGN1-201ENST00000288344 TUBD1Q9UJT1 453 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms