RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 OR6C74A6NCV1 312 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 TAF4O00268 1085 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 MPC1LP0DKB6 136 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 ID2Q02363 134 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 MAPK14Q16539 360 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 KIAA1161Q6NSJ0 714 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 DIABLOQ9NR28 239 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 PDE10AQ9Y233 779 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 A0A1W2PP18 115 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 SHOX2O60902 331 aaPredicted RBP17.94■□□□□ 0.46
PCDH1-201ENST00000287008 CLEC3AO75596 197 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 PRKD3O94806 890 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 APBB3O95704 486 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 GSTM3P21266 225 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 UFM1P61960 85 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 PUM1Q14671 1186 aaKnown RBP eCLIP17.94■□□□□ 0.46
PCDH1-201ENST00000287008 SLC5A9Q2M3M2 681 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 OR5T3Q8NGG3 340 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 C1QTNF1Q9BXJ1 281 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 HAPLN2Q9GZV7 340 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 RCBTB2O95199 551 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 RAB25P57735 213 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 NDUFA5Q16718 116 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 USP53Q70EK8 1073 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 ASPGQ86U10 573 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF382Q96SR6 550 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 LINC00597Q9H2U6 94 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 CENPMQ9NSP4 180 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 PRODH2Q9UF12 536 aa17.94■□□□□ 0.46
PCDH1-201ENST00000287008 GLOD5A6NK44 160 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 KHNYNO15037 678 aaKnown RBP17.93■□□□□ 0.46
PCDH1-201ENST00000287008 GP1BBP13224 206 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 DRD1P21728 446 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 GDI2P50395 445 aaKnown RBP17.93■□□□□ 0.46
PCDH1-201ENST00000287008 ST3GAL3Q11203 375 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 LIPJQ5W064 366 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 SLC2A7Q6PXP3 512 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 FAM131AQ6UXB0 335 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 CRELD1Q96HD1 420 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 TGM7Q96PF1 710 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 CHCHD6Q9BRQ6 235 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 DSN1Q9H410 356 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 RNF121Q9H920 327 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 SCML1Q9UN30 329 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 LOC110117498-PIK3R3F6TDL0 507 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 RLN1P04808 185 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 PEX2P28328 305 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 FRMD7Q6ZUT3 714 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 NANOGNBQ7Z5D8 188 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 DPH7Q9BTV6 452 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 KLHL31Q9H511 634 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 PLOD3O60568 738 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 DBIP07108 87 aaKnown RBP17.93■□□□□ 0.46
PCDH1-201ENST00000287008 GLDCP23378 1020 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 SPINT3P49223 89 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF678Q5SXM1 525 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 CST9Q5W186 159 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 PM20D1Q6GTS8 502 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 TCEAL6Q6IPX3 200 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 LINC00471Q8N535 108 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 FATE1Q969F0 183 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 SCRN2Q96FV2 425 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 OSBPL7Q9BZF2 842 aa17.93■□□□□ 0.46
PCDH1-201ENST00000287008 RPL36Q9Y3U8 105 aaKnown RBP17.93■□□□□ 0.46
PCDH1-201ENST00000287008 BHMG1C9JSJ3 638 aaPredicted RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SYPP08247 313 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 IL12AP29459 219 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 CLDN10P78369 228 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SLC10A2Q12908 348 aaPredicted RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SLCO6A1Q86UG4 719 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 COPS4Q9BT78 406 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 TAS2R9Q9NYW1 312 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 COMMD3-BMI1R4GMX3 469 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 THEGLP0DJG4 465 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 GSK3BP49841 420 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 XKP51811 444 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 GSTM4Q03013 218 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 CLEC12AQ5QGZ9 265 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF648Q5T619 568 aaPredicted RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 IGDCC3Q8IVU1 814 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 MRPL43Q8N983 215 aaKnown RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 OR9I1Q8NGQ6 314 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 OR6N1Q8NGY5 312 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 DEFB126Q9BYW3 111 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF395Q9H8N7 513 aaPredicted RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SAGE1Q9NXZ1 904 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 NKIRAS2Q9NYR9 191 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 LILRB3O75022 631 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 C9P02748 559 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 ADRB3P13945 408 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SMU1Q2TAY7 513 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 DEFB134Q4QY38 66 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 KHDC1Q4VXA5 237 aaKnown RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 B3GNT9Q6UX72 402 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 AMIGO1Q86WK6 493 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 LRRC17Q8N6Y2 441 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 OR52E4Q8NGH9 312 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 COQ8BQ96D53 544 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 DGCR14Q96DF8 476 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms