RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ATG9BQ674R7 924 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 COMMD6Q7Z4G1 85 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 OR4K1Q8NGD4 311 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 ZBTB18Q99592 522 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 S100A14Q9HCY8 104 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 DMRT3Q9NQL9 472 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 SLC25A37Q9NYZ2 338 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.54□□□□□ -0.72
GGPS1-201ENST00000282841 LEF1Q9UJU2 399 aaPredicted RBP10.54□□□□□ -0.72
GGPS1-201ENST00000282841 PRPF19Q9UMS4 504 aaKnown RBP10.54□□□□□ -0.72
GGPS1-201ENST00000282841 DGKBQ9Y6T7 804 aa10.54□□□□□ -0.72
GGPS1-201ENST00000282841 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 ZNF839A8K0R7 811 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 PRAMEF26H0Y7S4 382 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 TRIM38O00635 465 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 ATP6V1B2P21281 511 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 JAK1P23458 1154 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 LIPEQ05469 1076 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 FZD2Q14332 565 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 C8orf82Q6P1X6 216 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 TAF8Q7Z7C8 310 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 MAFAQ8NHW3 353 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 SMPDL3AQ92484 453 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 GTF2H4Q92759 462 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 TMEM125Q96AQ2 219 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 NACC2Q96BF6 587 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 CXorf40BQ96DE9 158 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 RNF31Q96EP0 1072 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 THUMPD3Q9BV44 507 aaKnown RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 TMEM121BQ9BXQ6 578 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 SEMA6AQ9H2E6 1030 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 CLMPQ9H6B4 373 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 SH3BP4Q9P0V3 963 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 GPR179Q6PRD1 2367 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 PCDH7O60245 1069 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 NDUFS2O75306 463 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 RPN2P04844 631 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 COX7A2P14406 83 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 PVRP15151 417 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 TYRP1P17643 537 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 POLR2CP19387 275 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 OR4D2P58180 307 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 KIAA1024LP59773 190 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 CBX3Q13185 183 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 SLC14A1Q13336 389 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 TRIM25Q14258 630 aaKnown RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 GPR18Q14330 331 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 LRRC32Q14392 662 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 UGT8Q16880 541 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 PRSS53Q2L4Q9 553 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 MUM1Q2TAK8 710 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 KIAA1614Q5VZ46 1190 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 ADHFE1Q8IWW8 467 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 MSRB3Q8IXL7 192 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 SNRNP27Q8WVK2 155 aaKnown RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 DTNBP1Q96EV8 351 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 HSPA12BQ96MM6 686 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 ORAI3Q9BRQ5 295 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 DPH7Q9BTV6 452 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 KLHL31Q9H511 634 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 CD300AQ9UGN4 299 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 PAIP2BQ9ULR5 123 aaKnown RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 NEUROG3Q9Y4Z2 214 aa10.53□□□□□ -0.72
GGPS1-201ENST00000282841 DNMT3AQ9Y6K1 912 aaPredicted RBP10.53□□□□□ -0.72
GGPS1-201ENST00000282841 GSAPA4D1B5 854 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 TMEM221A6NGB7 291 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 PRR19A6NJB7 356 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 B4DGG1 531 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 H3BNX3 289 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 HAT1O14929 419 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 SH3BP5O60239 455 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 PRKRAO75569 313 aaKnown RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 PIM1P11309 404 aaPredicted RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 MYF5P13349 255 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 TEAD1P28347 426 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 S100A3P33764 101 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 PPM1FP49593 454 aaPredicted RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 CSNK1EP49674 416 aaKnown RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 GSK3BP49841 420 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 CYP2A13Q16696 494 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 HIST2H2ACQ16777 129 aaPredicted RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 HIST2H2AA3Q6FI13 130 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 GALNT10Q86SR1 603 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 FAM46DQ8NEK8 389 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 OR10A6Q8NH74 314 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 SCARF2Q96GP6 870 aaPredicted RBP10.52□□□□□ -0.72
GGPS1-201ENST00000282841 SLC6A20Q9NP91 592 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 GID8Q9NWU2 228 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 TAAR2Q9P1P5 351 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 PCDHB14Q9Y5E9 798 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 PCDHA9Q9Y5H5 950 aa10.52□□□□□ -0.72
GGPS1-201ENST00000282841 A0A1W2PPC4 97 aa10.52□□□□□ -0.73
GGPS1-201ENST00000282841 ANKDD1BA6NHY2 528 aa10.52□□□□□ -0.73
GGPS1-201ENST00000282841 GLOD5A6NK44 160 aa10.52□□□□□ -0.73
GGPS1-201ENST00000282841 GABRR3A8MPY1 467 aa10.52□□□□□ -0.73
GGPS1-201ENST00000282841 GPR89AB7ZAQ6 455 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms