RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ADGRD1Q6QNK2 874 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 AQP11Q8NBQ7 271 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 RAB9BQ9NP90 201 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 CNTN6Q9UQ52 1028 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 BACE2Q9Y5Z0 518 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 FSCN2O14926 492 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 MPPED1O15442 326 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 MFSD13AQ14CX5 517 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 SDHAF4Q5VUM1 108 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 C12orf45Q8N5I9 185 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ANKRD63C9JTQ0 380 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GMDSO60547 372 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 SCAF4O95104 1147 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GTF2F2P13984 249 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 CAMLGP49069 296 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TAS2R40P59535 323 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 DCBLD1Q8N8Z6 715 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 FBXO22Q8NEZ5 403 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TOR1AIP2Q8NFQ8 470 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TCTEX1D2Q8WW35 142 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 C7orf34Q96L11 122 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF641Q96N77 438 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 Q9N2J8 555 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 NLGN3Q9NZ94 848 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GPRC5BQ9NZH0 403 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 EXOSC1Q9Y3B2 195 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 EI24O14681 340 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 FLRT2O43155 660 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 HOXD8P13378 290 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PBX3P40426 434 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 IDH3AP50213 366 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 SEC13P55735 322 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 OC90Q02509 493 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TAF10Q12962 218 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF404Q494X3 552 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 FAM83HQ6ZRV2 1179 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 VASH1Q7L8A9 365 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ASCC1Q8N9N2 400 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 NAXEQ8NCW5 288 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 SLC22A8Q8TCC7 542 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 COQ10BQ9H8M1 238 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ADAP2Q9NPF8 381 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PCTPQ9UKL6 214 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 C17orf113A0A1B0GUU1 675 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GABRDO14764 452 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 RAC2P15153 192 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 S100A7P31151 101 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 SHMT1P34896 483 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PSPHP78330 225 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TDGQ13569 410 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 RAB41Q5JT25 222 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PLEKHG7Q6ZR37 379 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 FAM110BQ8TC76 370 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 CHPT1Q8WUD6 406 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 NMUR1Q9HB89 426 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 A8MVJ9 347 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 GNB3P16520 340 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ENTPD1P49961 510 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 DCST2Q5T1A1 773 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 SLC9B2Q86UD5 537 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TMEM156Q8N614 296 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PPTC7Q8NI37 304 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 LNX1Q8TBB1 728 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 PEX13Q92968 403 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 P2RX7Q99572 595 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 NIFKQ9BYG3 293 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TIGARQ9NQ88 270 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 ZCCHC3Q9NUD5 404 aaKnown RBP8.49□□□□□ -1.05
NIPBL-201ENST00000282516 TDP1Q9NUW8 608 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 KCNIP1Q9NZI2 227 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 DNAJB4Q9UDY4 337 aa8.49□□□□□ -1.05
NIPBL-201ENST00000282516 A0A1B0GVT2 93 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 MAFO75444 373 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 AHSA1O95433 338 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ADRA1BP35368 520 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 MALLQ13021 153 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 BATFQ16520 125 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 KRBOX4Q5JUW0 171 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 RPL13AP3Q6NVV1 102 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF529Q6P280 563 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 LENG8Q96PV6 779 aaPredicted RBP8.48□□□□□ -1.05
NIPBL-201ENST00000282516 SOX9P48436 509 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 NDST2P52849 883 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CASP6P55212 293 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ITPK1Q13572 414 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 DUOXA1Q1HG43 343 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF181Q2M3W8 571 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ADAMTS13Q76LX8 1427 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ZNF280BQ86YH2 543 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 CAMKVQ8NCB2 501 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 OR6N1Q8NGY5 312 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 MBD5Q9P267 1494 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 A0A1W2PPL8 197 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 ARGFXA6NJG6 315 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 FAM170BA6NMN3 283 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 XPNPEP2O43895 674 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 NRIP1P48552 1158 aa8.48□□□□□ -1.05
NIPBL-201ENST00000282516 NOMO3P69849 1222 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms