RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
C9orf3-201ENST00000277198 SCN2BO60939 215 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 GSNP06396 782 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CD72P21854 359 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 TACR1P25103 407 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CDKN2CP42773 168 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ST13P50502 369 aaKnown RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 DAPP51397 102 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 MAPK10P53779 464 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 B4GALNT1Q00973 533 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PTSQ03393 145 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 RELAQ04206 551 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 LRRC74AQ0VAA2 488 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 NPTX1Q15818 432 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 DGUOKQ16854 277 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PROX2Q3B8N5 592 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PLEKHG6Q3KR16 790 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CARD16Q5EG05 197 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 DGKKQ5KSL6 1271 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 LRRC66Q68CR7 880 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 B3GNT8Q7Z7M8 397 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 TSPAN33Q86UF1 283 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 IGFN1Q86VF2 1251 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 RASGRP3Q8IV61 690 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZZZ3Q8IYH5 903 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 YIPF6Q96EC8 236 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 APIPQ96GX9 242 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZFYVE19Q96K21 471 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PANX1Q96RD7 426 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 SLC46A2Q9BY10 475 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 FOXQ1Q9C009 403 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CEP44Q9C0F1 390 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CCDC90BQ9GZT6 254 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 SUV39H2Q9H5I1 410 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 FBXO8Q9NRD0 319 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CCL26Q9Y258 94 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 RUVBL1Q9Y265 456 aaKnown RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PCDHGA10Q9Y5H3 936 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 GMPPBQ9Y5P6 360 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 KMT2EQ8IZD2 1858 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 MAGEB17A8MXT2 336 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 E9PQ18 207 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 FPGTO14772 594 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF682O95780 498 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 NTRK1P04629 796 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 AVPR2P30518 371 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 MLLT10P55197 1068 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ITGA1P56199 1179 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 LMAN2Q12907 356 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZXDCQ2QGD7 858 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ATP13A5Q4VNC0 1218 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 KIAA1614Q5VZ46 1190 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ANKRD34AQ69YU3 496 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 OR4F3Q6IEY1 312 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZCCHC8Q6NZY4 707 aaKnown RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PRSS48Q7RTY5 328 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZNF551Q7Z340 670 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ANKRD46Q86W74 232 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 HORMAD1Q86X24 394 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ZSWIM9Q86XI8 627 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PRSS33Q8NF86 280 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 CNIH3Q8TBE1 160 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 ELSPBP1Q96BH3 223 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 FBXL8Q96CD0 374 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 APOLD1Q96LR9 279 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 SLC22A12Q96S37 553 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 PITX2Q99697 317 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 MROQ9BYG7 248 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 REXO4Q9GZR2 422 aaKnown RBP12.47□□□□□ -0.41
C9orf3-201ENST00000277198 AKIP1Q9NQ31 210 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 SLC2A4RGQ9NR83 387 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 VNN3Q9NY84 501 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 GPRC5BQ9NZH0 403 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 HS3ST2Q9Y278 367 aa12.47□□□□□ -0.41
C9orf3-201ENST00000277198 SHISA7A6NL88 538 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 J3QRK9 145 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 M0R3G1 203 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 SCAMP3O14828 347 aaKnown RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 AP2A2O94973 939 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ENGP17813 658 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 EFNA1P20827 205 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 GKP32189 559 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 OPRL1P41146 370 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 CLK3P49761 638 aaKnown RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 NEK2P51955 445 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 SLC7A9P82251 487 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ZXDBP98169 803 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 PIGFQ07326 219 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 HSPA14Q0VDF9 509 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ITGADQ13349 1161 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 OXA1LQ15070 435 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 FAHD1Q6P587 224 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 CYP2U1Q7Z449 544 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 CAMKMTQ7Z624 323 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 P2RY8Q86VZ1 359 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms