RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SPPL3Q8TCT6 385 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 GRHL3Q8TE85 626 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 CANT1Q8WVQ1 401 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 C1GALT1C1Q96EU7 318 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 SLC22A12Q96S37 553 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 OR8D2Q9GZM6 311 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ZBP1Q9H171 429 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 IRGMA1A4Y4 181 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ELOA3DA6NLF2 546 aaPredicted RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 COQ9O75208 318 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 HLA-FP30511 346 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 DOC2AQ14183 400 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 PTGR1Q14914 329 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ELOA3BQ3SY89 546 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ELOA3Q8NG57 546 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 TP53INP1Q96A56 240 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 TRIB3Q96RU7 358 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 IFT27Q9BW83 186 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 AQP12BA6NM10 295 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 AURKAO14965 403 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 CDC123O75794 336 aaPredicted RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 PSMD7P51665 324 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 DDI2Q5TDH0 399 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 EMC10Q5UCC4 262 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ANKRD33Q7Z3H0 272 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ASPGQ86U10 573 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 AQP12AQ8IXF9 295 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 TMEM156Q8N614 296 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ASB9Q96DX5 294 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 PKP4Q99569 1192 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 IL1RAPQ9NPH3 570 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 RPRD1BQ9NQG5 326 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.26□□□□□ -0.29
NPC1-201ENST00000269228 SATB2Q9UPW6 733 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 TRBC2A0A5B9 178 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 HNRNPA2B1P22626 353 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 DUSP3P51452 185 aaPredicted RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 DEFB134Q4QY38 66 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 PDCD4Q53EL6 469 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.26□□□□□ -0.29
NPC1-201ENST00000269228 C11orf88Q6PI97 169 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 RPTNQ6XPR3 784 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 B3GNT6Q6ZMB0 384 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 TMPRSS11AQ6ZMR5 421 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 CXXC5Q7LFL8 322 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 GPR26Q8NDV2 337 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 OR4C6Q8NH72 309 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 HHIPQ96QV1 700 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 KATNBL1Q9H079 304 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 POLR2J3Q9H1A7 115 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 ZNF576Q9H609 170 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 HEBP1Q9NRV9 189 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 CFL2Q9Y281 166 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 MYO5AQ9Y4I1 1855 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 MUSKO15146 869 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 RGS10O43665 173 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 ENPP2Q13822 863 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 TRIM71Q2Q1W2 868 aaKnown RBP13.26□□□□□ -0.29
NPC1-201ENST00000269228 NADSYN1Q6IA69 706 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 GAREM2Q75VX8 874 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 MDGA1Q8NFP4 955 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 OR5M3Q8NGP4 307 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 SLC25A36Q96CQ1 311 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 MCM8Q9UJA3 840 aa13.26□□□□□ -0.29
NPC1-201ENST00000269228 FAM170BA6NMN3 283 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 FAM189A1O60320 539 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 AOC1P19801 751 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 ITGB7P26010 798 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 RGRP47804 291 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 HNRNPKP61978 463 aaKnown RBP eCLIP13.25□□□□□ -0.29
NPC1-201ENST00000269228 ZNF267Q14586 743 aaPredicted RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 LPAL2Q16609 132 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 RBM44Q6ZP01 1051 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 NUP54Q7Z3B4 507 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 ZNF527Q8NB42 609 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 OR56A1Q8NGH5 318 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 OR10Q1Q8NGQ4 319 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 ENKURQ8TC29 256 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 SLC39A13Q96H72 371 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 OR51V1Q9H2C8 321 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 MKKSQ9NPJ1 570 aaPredicted RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 TVP23BQ9NYZ1 205 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 SCML1Q9UN30 329 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 PTGDR2Q9Y5Y4 395 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 KLHL33A6NCF5 533 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 PEX12O00623 359 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 RSL1D1O76021 490 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 SLC7A1P30825 629 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 RPP38P78345 283 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 PPP1R8Q12972 351 aaKnown RBP13.25□□□□□ -0.29
NPC1-201ENST00000269228 ADGRE1Q14246 886 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 HSD11B1LQ7Z5J1 315 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 CAMK1GQ96NX5 476 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 SMIM14Q96QK8 99 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 REEP4Q9H6H4 257 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 HMG20AQ9NP66 347 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
NPC1-201ENST00000269228 FEZF1A0PJY2 475 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms