RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 PAQR7Q86WK9 346 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 WDR75Q8IWA0 830 aaKnown RBP11.08□□□□□ -0.64
PFDN1-201ENST00000261813 DNAJC22Q8N4W6 341 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 ZUFSPQ96AP4 578 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 ESAMQ96AP7 390 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 RNF31Q96EP0 1072 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 FAR2Q96K12 515 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 PLCD4Q9BRC7 762 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 DPH7Q9BTV6 452 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 DDA1Q9BW61 102 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 CD244Q9BZW8 370 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 PCBD2Q9H0N5 130 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 OPTCQ9UBM4 332 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 DKK4Q9UBT3 224 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 SLC22A14Q9Y267 594 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 RAP2CQ9Y3L5 183 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 ASB1Q9Y576 335 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 PCDHGA7Q9Y5G6 932 aa11.08□□□□□ -0.64
PFDN1-201ENST00000261813 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 H3BMH7 237 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 K7EPI3 171 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 NVLO15381 856 aaKnown RBP11.07□□□□□ -0.64
PFDN1-201ENST00000261813 FAM107AO95990 144 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 RPS17P08708 135 aaKnown RBP11.07□□□□□ -0.64
PFDN1-201ENST00000261813 EPB42P16452 691 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 EEF1DP29692 281 aaKnown RBP11.07□□□□□ -0.64
PFDN1-201ENST00000261813 HSPA7P48741 367 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 ERVPABLB-1P60509 514 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 OCRLQ01968 901 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 CLCQ05315 142 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 LCP2Q13094 533 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 IL11RAQ14626 422 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 UNC50Q53HI1 259 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 DCAF12Q5T6F0 453 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 FRMD7Q6ZUT3 714 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 THOC6Q86W42 341 aaKnown RBP11.07□□□□□ -0.64
PFDN1-201ENST00000261813 PPP1R3BQ86XI6 285 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 OR1L3Q8NH93 324 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 POM121Q96HA1 1249 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF578Q96N58 590 aaPredicted RBP11.07□□□□□ -0.64
PFDN1-201ENST00000261813 FCRL4Q96PJ5 515 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 TMEM237Q96Q45 408 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 TRIM55Q9BYV6 548 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 B3GNT4Q9C0J1 378 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 SYNPO2LQ9H987 977 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 THSD1Q9NS62 852 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 ANKMY1Q9P2S6 941 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 VTI1BQ9UEU0 232 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 PILRAQ9UKJ1 303 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 RARRES3Q9UL19 164 aa11.07□□□□□ -0.64
PFDN1-201ENST00000261813 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
PFDN1-201ENST00000261813 TMEM150CB9EJG8 249 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 H7BY64 318 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 TERTO14746 1132 aaKnown RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 HAT1O14929 419 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 TLX3O43711 291 aaPredicted RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 WDR47O94967 919 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 OTCP00480 354 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 CDH1P12830 882 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF28P17035 718 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 SOX11P35716 441 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 AGTR2P50052 363 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 RPL14P50914 215 aaKnown RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 PKNOX1P55347 436 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 NAA25Q14CX7 972 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ARL13AQ5H913 290 aaPredicted RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 TMEM164Q5U3C3 297 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 FBXO42Q6P3S6 717 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 CYB5D1Q6P9G0 228 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ZCCHC23Q6ZST2 131 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 RNF44Q7L0R7 432 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 C17orf64Q86WR6 236 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ZFAND4Q86XD8 727 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 LRRC34Q8IZ02 419 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 PIWIL2Q8TC59 973 aaKnown RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ZNF483Q8TF39 744 aaPredicted RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 NEIL2Q969S2 332 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ATP6V1E2Q96A05 226 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 PRAP1Q96NZ9 151 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 TEFMQ96QE5 360 aaKnown RBP11.06□□□□□ -0.64
PFDN1-201ENST00000261813 CCT8L2Q96SF2 557 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ZPBPQ9BS86 351 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 HAUS8Q9BT25 410 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ASPSCR1Q9BZE9 553 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 SPRY4Q9C004 299 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 FANCEQ9HB96 536 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 TMEM184CQ9NVA4 438 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 GPRC5BQ9NZH0 403 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 HAO1Q9UJM8 370 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 PCTPQ9UKL6 214 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 ACSL6Q9UKU0 697 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 PLCL2Q9UPR0 1127 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 KNTC1P50748 2209 aa11.06□□□□□ -0.64
PFDN1-201ENST00000261813 A0A0J9YVX5 310 aa11.05□□□□□ -0.64
PFDN1-201ENST00000261813 LRRC14BA6NHZ5 514 aa11.05□□□□□ -0.64
PFDN1-201ENST00000261813 E2F3O00716 465 aa11.05□□□□□ -0.64
PFDN1-201ENST00000261813 RRP9O43818 475 aaKnown RBP11.05□□□□□ -0.64
PFDN1-201ENST00000261813 CCNT2O60583 730 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms