RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ZNF431Q8TF32 576 aaPredicted RBP11.94□□□□□ -0.5
USP30-201ENST00000257548 SNX18Q96RF0 628 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 SLC6A13Q9NSD5 602 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 NUDT4Q9NZJ9 180 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 PTGFRNQ9P2B2 879 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 MAU2Q9Y6X3 613 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 QSER1Q2KHR3 1735 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 ORC5O43913 435 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 CBLP22681 906 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 PGFP49763 221 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 KCNQ1P51787 676 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 PPIGQ13427 754 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP30-201ENST00000257548 SUZ12Q15022 739 aaKnown RBP11.94□□□□□ -0.5
USP30-201ENST00000257548 RASSF6Q6ZTQ3 369 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 BCDIN3DQ7Z5W3 292 aaKnown RBP11.94□□□□□ -0.5
USP30-201ENST00000257548 OR6F1Q8NGZ6 308 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 TMED9Q9BVK6 235 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 BOCQ9BWV1 1114 aa11.94□□□□□ -0.5
USP30-201ENST00000257548 RPS17P08708 135 aaKnown RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 ANXA4P09525 319 aaPredicted RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 ADORA3P0DMS8 318 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 CSTF2P33240 577 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP30-201ENST00000257548 P2RX3P56373 397 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 CSNK2BP67870 215 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MAB21L1Q13394 359 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 POM121L1PQ3SYA9 428 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 SYTL3Q4VX76 610 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 PIK3R6Q5UE93 754 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ADCK2Q7Z695 626 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ENTHD1Q8IYW4 607 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 C8orf48Q96LL4 319 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 DUSP21Q9H596 190 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 GORASP2Q9H8Y8 452 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 SLC25A37Q9NYZ2 338 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ACSL6Q9UKU0 697 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ASCC3Q8N3C0 2202 aaKnown RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 CHURC1-FNTBB4DL54 471 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 OR7A10O76100 309 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 GKP32189 559 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 SLC11A2P49281 568 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 TTC3P53804 2025 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 CDC42EP1Q00587 391 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MFSD10Q14728 455 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 EXOC3L2Q2M3D2 409 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 LEXMQ3ZCV2 418 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 CLEC12AQ5QGZ9 265 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 TNFAIP8L2Q6P589 184 aaPredicted RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 SUSD1Q6UWL2 747 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 FAM109AQ8N4B1 249 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 AKAP1Q92667 903 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP30-201ENST00000257548 QPCTLQ9NXS2 382 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 RIMKLBQ9ULI2 386 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 C17orf102A2RUQ5 167 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 OR2A25A4D2G3 310 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 FAM227AF5H4B4 570 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 INMT-MINDY4F8WBC2 141 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MANBAO00462 879 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 STX16O14662 325 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 CH25HO95992 272 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ESR1P03372 595 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 ADRA1AP35348 466 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 NNMTP40261 264 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MAN2A2P49641 1150 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 SPHARQ15513 63 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 BAK1Q16611 211 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 PM20D1Q6GTS8 502 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MEX3DQ86XN8 651 aaKnown RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 PHYKPLQ8IUZ5 450 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 BEND7Q8N7W2 519 aaPredicted RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 IL17RDQ8NFM7 739 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 FAM129BQ96TA1 746 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 HDHD5Q9BXW7 423 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MRPL39Q9NYK5 338 aaKnown RBP11.93□□□□□ -0.5
USP30-201ENST00000257548 ZNF225Q9UK10 706 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 MAPRE3Q9UPY8 281 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 CMAHPQ9Y471 501 aa11.93□□□□□ -0.5
USP30-201ENST00000257548 E2F3O00716 465 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 MYCP01106 439 aaPredicted RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 PDYNP01213 254 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 FCER2P06734 321 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 PRKACAP17612 351 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 CNR2P34972 360 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 HK3P52790 923 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 GRIK2Q13002 908 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 MS4A13Q5J8X5 152 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 SPOUT1Q5T280 376 aaKnown RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 FAM171A1Q5VUB5 890 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 RNF219Q5W0B1 726 aaPredicted RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 SIGIRRQ6IA17 410 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 CELF5Q8N6W0 485 aaKnown RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 PPTC7Q8NI37 304 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 ASB15Q8WXK1 588 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 ARPC5LQ9BPX5 153 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 BCL7BQ9BQE9 202 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 RNF121Q9H920 327 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 RBPJLQ9UBG7 517 aa11.92□□□□□ -0.5
USP30-201ENST00000257548 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
USP30-201ENST00000257548 PTPRFP10586 1907 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms