RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ZNF655Q8N720 491 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 CAMKVQ8NCB2 501 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 MGARPQ8TDB4 240 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 RERGQ96A58 199 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 REPS1Q96D71 796 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 SLC46A1Q96NT5 459 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 CDK15Q96Q40 435 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 SPRY4Q9C004 299 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 EML4Q9HC35 981 aaKnown RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 APMAPQ9HDC9 416 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 PISDQ9UG56 409 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
VPS25-201ENST00000253794 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
VPS25-201ENST00000253794 C9orf172C9J069 976 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 FOXE1O00358 373 aaPredicted RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 P2RX6O15547 441 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 OR2B3O76000 313 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 OR4F21O95013 312 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 CTSBP07858 339 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 SERPINA6P08185 405 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 SLC35G6P0C7Q6 338 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 BGNP21810 368 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 CCR10P46092 362 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 VSX2P58304 361 aaPredicted RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 ABCE1P61221 599 aaKnown RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 GABREP78334 506 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 FOXM1Q08050 763 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 CYP4F3Q08477 520 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 BST1Q10588 318 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 HYAL2Q12891 473 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 GRM7Q14831 915 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 ZRSR2Q15696 482 aaKnown RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 WASHC2DQ5SRD0 308 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 FRG2Q64ET8 278 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 ATG16L1Q676U5 607 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 RGS9BPQ6ZS82 235 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 CUZD1Q86UP6 607 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 GPR135Q8IZ08 494 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 KIRREL3Q8IZU9 778 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 CSNK1A1LQ8N752 337 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 ZNF473Q8WTR7 871 aaKnown RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 SLC13A3Q8WWT9 602 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 N4BP2L2Q92802 583 aaPredicted RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 NXPE2Q96DL1 559 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 LRFN5Q96NI6 719 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 FRG2BQ96QU4 278 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 SLC6A16Q9GZN6 736 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 MID1IP1Q9NPA3 183 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 INTS9Q9NV88 658 aaKnown RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 SRPK3Q9UPE1 567 aa13.46□□□□□ -0.25
VPS25-201ENST00000253794 TMEM184BQ9Y519 407 aaPredicted RBP13.46□□□□□ -0.25
VPS25-201ENST00000253794 KIF26BQ2KJY2 2108 aa13.46□□□□□ -0.26
VPS25-201ENST00000253794 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 WDR91A4D1P6 747 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 ANKDD1BA6NHY2 528 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 CAPN1P07384 714 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 CHRNGP07510 517 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 HBQ1P09105 142 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 UROSP10746 265 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 CD82P27701 267 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 ARFIP1P53367 373 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 ARSFP54793 590 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 STX3Q13277 289 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 FAM53BQ14153 422 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 RBBP5Q15291 538 aaKnown RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 CPSF6Q16630 551 aaKnown RBP eCLIP13.45□□□□□ -0.26
VPS25-201ENST00000253794 TMEM164Q5U3C3 297 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 RHBDD2Q6NTF9 364 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 PWWP2BQ6NUJ5 590 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 TMEM214Q6NUQ4 689 aaKnown RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 TTC29Q8NA56 475 aaPredicted RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 HUS1BQ8NHY5 278 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 PPP1R14CQ8TAE6 165 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 CKAP2Q8WWK9 683 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 USP7Q93009 1102 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 PMEPA1Q969W9 287 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 SORT1Q99523 831 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 MS4A8Q9BY19 250 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 NLNQ9BYT8 704 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 SPRTNQ9H040 489 aaPredicted RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 MANSC1Q9H8J5 431 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 TNFRSF12AQ9NP84 129 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 FAM53CQ9NYF3 392 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 SNX6Q9UNH7 406 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 RUVBL1Q9Y265 456 aaKnown RBP13.45□□□□□ -0.26
VPS25-201ENST00000253794 B3GALT1Q9Y5Z6 326 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 SLC22A7Q9Y694 548 aa13.45□□□□□ -0.26
VPS25-201ENST00000253794 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 MANBAO00462 879 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 NDUFS4O43181 175 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 ITM2AO43736 263 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 SCRG1O75711 98 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 TNFSF15O95150 251 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 TIAF1O95411 115 aa13.44□□□□□ -0.26
VPS25-201ENST00000253794 DLGAP3O95886 979 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms