RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 TGFBR2P37173 567 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 IFITM3Q01628 133 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 TEAD4Q15561 434 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.05■□□□□ 0.48
CPSF3-201ENST00000238112 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
CPSF3-201ENST00000238112 ANGPTL8Q6UXH0 198 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 GDPD4Q6W3E5 623 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 Q6ZVU0 165 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 PAGE2Q7Z2X7 111 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 CHST14Q8NCH0 376 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 C11orf65Q8NCR3 313 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 C11orf24Q96F05 449 aaPredicted RBP18.05■□□□□ 0.48
CPSF3-201ENST00000238112 LMLNQ96KR4 655 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 SLIRPQ9GZT3 109 aaKnown RBP18.05■□□□□ 0.48
CPSF3-201ENST00000238112 PNMA8BQ9ULN7 279 aaPredicted RBP18.05■□□□□ 0.48
CPSF3-201ENST00000238112 RNF6Q9Y252 685 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 GNG14A0A1W2PPG7 69 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 LEFTY2O00292 366 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 CXCL10P02778 98 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 ZNF30P17039 623 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 CRYBA2P53672 197 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 ELP6Q0PNE2 266 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 GPR156Q8NFN8 814 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 OR4A15Q8NGL6 344 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 SLC38A4Q969I6 547 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 SH3BP4Q9P0V3 963 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 STOX2Q9P2F5 926 aaPredicted RBP18.05■□□□□ 0.48
CPSF3-201ENST00000238112 SLCO3A1Q9UIG8 710 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 TESMINQ9Y4I5 508 aa18.05■□□□□ 0.48
CPSF3-201ENST00000238112 SCN5AQ14524 2016 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 TTC34A8MYJ7 566 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 TNFRSF11BO00300 401 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ADAMDEC1O15204 470 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 PSIP1O75475 530 aaKnown RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ETHE1O95571 254 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ABCB1P08183 1280 aaPredicted RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 CYP2A6P11509 494 aaPredicted RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 RAE1P78406 368 aaKnown RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 GAB1Q13480 694 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 SPIN4Q56A73 249 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 NAGSQ8N159 534 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 TMEM159Q96B96 161 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 DACH2Q96NX9 599 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 SIGLEC11Q96RL6 698 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 BTBD2Q9BX70 525 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ANKHQ9HCJ1 492 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ZNF282Q9UDV7 671 aaPredicted RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 OSGIN1Q9UJX0 560 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ZNF451Q9Y4E5 1061 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 TMEM202A6NGA9 273 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 SGTAO43765 313 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 VIPP01282 170 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 CATP04040 527 aaKnown RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 GJA1P17302 382 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 CA8P35219 290 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 TGFBR1P36897 503 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 CRATP43155 626 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 DNASE1L3Q13609 305 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 SYT16Q17RD7 645 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 ZNF648Q5T619 568 aaPredicted RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 HSD11B1LQ7Z5J1 315 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 CAMKMTQ7Z624 323 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 RASGRP3Q8IV61 690 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 MCFD2Q8NI22 146 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 MYDGFQ969H8 173 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 SMG9Q9H0W8 520 aaKnown RBP18.04■□□□□ 0.48
CPSF3-201ENST00000238112 DSN1Q9H410 356 aa18.04■□□□□ 0.48
CPSF3-201ENST00000238112 E9PQ18 207 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 IDSP22304 550 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 TGM1P22735 817 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 GGT2P36268 569 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 RECQLP46063 649 aaPredicted RBP18.03■□□□□ 0.48
CPSF3-201ENST00000238112 RPS3AP61247 264 aaKnown RBP18.03■□□□□ 0.48
CPSF3-201ENST00000238112 SELENOWP63302 87 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 ADNP2Q6IQ32 1131 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 Q6ZPB1 254 aaPredicted RBP18.03■□□□□ 0.48
CPSF3-201ENST00000238112 PLEKHG7Q6ZR37 379 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 Q6ZVL8 140 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 FAM124AQ86V42 546 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 RAVER1Q8IY67 606 aaKnown RBP18.03■□□□□ 0.48
CPSF3-201ENST00000238112 OR4K3Q96R72 315 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 FEVQ99581 238 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 DCSTAMPQ9H295 470 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 RAPGEFL1Q9UHV5 662 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 LYVE1Q9Y5Y7 322 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 A0A1W2PRU2 124 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 QSOX1O00391 747 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 TEX28O15482 410 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 AIREO43918 545 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 VIPR1P32241 457 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 BDKRB1P46663 353 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 EIF2B2P49770 351 aaKnown RBP18.03■□□□□ 0.48
CPSF3-201ENST00000238112 LRRC74AQ0VAA2 488 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 BRAT1Q6PJG6 821 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 OR7G3Q8NG95 312 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 HUS1BQ8NHY5 278 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 TIFAQ96CG3 184 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 COQ8BQ96D53 544 aa18.03■□□□□ 0.48
CPSF3-201ENST00000238112 NDUFAF4Q9P032 175 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms