RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF35P13682 527 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 GPX3P22352 226 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 C1QTNF8P60827 252 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 PEA15Q15121 130 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 GCNT6Q5T4J0 391 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 HACD4Q5VWC8 232 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 LYPD8Q6UX82 237 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ANKRD46Q86W74 232 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 CDK20Q8IZL9 346 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 HS3ST5Q8IZT8 346 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 NEIL3Q8TAT5 605 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 SORBS1Q9BX66 1292 aaKnown RBP12.49□□□□□ -0.41
VAMP4-201ENST00000236192 B4DXG7 233 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 PPP3CBP16298 524 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 PM20D1Q6GTS8 502 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 ALKAL2Q6UX46 152 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 THEM5Q8N1Q8 247 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 CPA6Q8N4T0 437 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 DTWD1Q8N5C7 304 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 OR7G2Q8NG99 324 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 LINGO1Q96FE5 620 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 TAAR1Q96RJ0 339 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 MGME1Q9BQP7 344 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 RGCCQ9H4X1 137 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 TMEM134Q9H6X4 195 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
VAMP4-201ENST00000236192 OR6C74A6NCV1 312 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 CAPNS1P04632 268 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PRPS2P11908 318 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 DPYSL2Q16555 572 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF300Q96RE9 604 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 MYOCQ99972 504 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ASF1AQ9Y294 204 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 SIX3O95343 332 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ESR1P03372 595 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PNPLA4P41247 253 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 AIF1P55008 147 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 GPR50Q13585 617 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 GRB14Q14449 540 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 MEDAGQ5VYS4 303 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 DCUN1D3Q8IWE4 304 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ASB7Q9H672 318 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 TEX10Q9NXF1 929 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 LINC00862A6NCI5 91 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 EPOP01588 193 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 CD9P21926 228 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 DGKAP23743 735 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 TKTL1P51854 596 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 BTG1P62324 171 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 CREMQ03060 361 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 AMHR2Q16671 573 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PAPD4Q6PIY7 484 aaKnown RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 DENND1CQ8IV53 801 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 BTN2A3PQ96KV6 586 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 GLOD4Q9HC38 313 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 NANSQ9NR45 359 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ASF1BQ9NVP2 202 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 NUDT4Q9NZJ9 180 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 TJP2Q9UDY2 1190 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 DLGAP4Q9Y2H0 992 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 IL1AP01583 271 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 NOS3P29474 1203 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PSMD8P48556 350 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 HTRA4P83105 476 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 LARS2Q15031 903 aaKnown RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 C21orf62-AS1Q17RA5 79 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 INTS6LQ5JSJ4 861 aaKnown RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 ZNF648Q5T619 568 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PRAMEF17Q5VTA0 474 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 KCT2Q8NC54 265 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 C2CD4CQ8TF44 421 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 IER2Q9BTL4 223 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 PITHD1Q9GZP4 211 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 SLC38A1Q9H2H9 487 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 EXOSC1Q9Y3B2 195 aaKnown RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
VAMP4-201ENST00000236192 CRYBG1Q9Y4K1 1723 aa12.48□□□□□ -0.41
VAMP4-201ENST00000236192 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 STAU1O95793 577 aaKnown RBP12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SLC35E2BP0CK96 405 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 HSPA7P48741 367 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SYTL3Q4VX76 610 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 OR4L1Q8NH43 312 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GIMAP1Q8WWP7 306 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 GIMAP5Q96F15 307 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TSSK6Q9BXA6 273 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 FNIP2Q9P278 1114 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 DUOX1Q9NRD9 1551 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 TO15178 435 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 SLC16A6O15403 523 aa12.47□□□□□ -0.41
VAMP4-201ENST00000236192 MBP02144 154 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms