RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FCRL3Q96P31 734 aaPredicted RBP17.88■□□□□ 0.45
CLIP2-201ENST00000223398 TRIM2Q9C040 744 aa17.88■□□□□ 0.45
CLIP2-201ENST00000223398 CCNOP22674 350 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 LAPTM4BQ86VI4 370 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.87■□□□□ 0.455e-6■■■■■ 81.8
CLIP2-201ENST00000223398 CCDC116Q8IYX3 515 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SVOPLQ8N434 492 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 NAXEQ8NCW5 288 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 FAR1Q8WVX9 515 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 THUMPD1Q9NXG2 353 aaKnown RBP17.87■□□□□ 0.45
CLIP2-201ENST00000223398 ARHGEF33A8MVX0 844 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 THEGLP0DJG4 465 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 PCSK2P16519 638 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 CDK6Q00534 326 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SPANXN4Q5MJ08 99 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 C1orf220Q5T0J3 134 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 RAB8BQ92930 207 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 FARSBQ9NSD9 589 aaKnown RBP17.87■□□□□ 0.45
CLIP2-201ENST00000223398 LOC110117498-PIK3R3F6TDL0 507 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 H3BSH0 61 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 OXTRP30559 389 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF41P51814 821 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SCRN3Q0VDG4 424 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SNTA1Q13424 505 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SLC17A9Q9BYT1 436 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 KLHL31Q9H511 634 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 MRM3Q9HC36 420 aaKnown RBP17.87■□□□□ 0.45
CLIP2-201ENST00000223398 PDE7BQ9NP56 450 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 POMPQ9Y244 141 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 FEZF1A0PJY2 475 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 NPIPA5E9PKD4 350 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 M0QX08 132 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 TFECO14948 347 aaPredicted RBP17.87■□□□□ 0.45
CLIP2-201ENST00000223398 ADARP55265 1226 aaKnown RBP17.87■□□□□ 0.45
CLIP2-201ENST00000223398 DSC3Q14574 896 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 COLEC12Q5KU26 742 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SLC30A8Q8IWU4 369 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 CASD1Q96PB1 797 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 KCNC2Q96PR1 638 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 SLC2A11Q9BYW1 496 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 NPIPA1Q9UND3 350 aa17.87■□□□□ 0.45
CLIP2-201ENST00000223398 C5AR1P21730 350 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 PLD6Q8N2A8 252 aaKnown RBP17.86■□□□□ 0.45
CLIP2-201ENST00000223398 TRPV1Q8NER1 839 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 DNAJB8Q8NHS0 232 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 RIMKLBQ9ULI2 386 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 ANXA2P2A6NMY6 339 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 BLOC1S5-TXNDC5H3BN57 136 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 CH25HO95992 272 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 ANXA2P07355 339 aaKnown RBP17.86■□□□□ 0.45
CLIP2-201ENST00000223398 C1orf94Q6P1W5 598 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 CAMK1GQ96NX5 476 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 MPZL2O60487 215 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 XKP51811 444 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 SPATC1Q76KD6 591 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 ASPGQ86U10 573 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 LGI4Q8N135 537 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 SLC39A11Q8N1S5 342 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 ZSCAN1Q8NBB4 408 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 EIF1AYO14602 144 aaKnown RBP17.86■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF208O43345 1280 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 PRKD3O94806 890 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 PRKAR1AP10644 381 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 RNF130Q86XS8 419 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 ZSWIM3Q96MP5 696 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 DNAJB9Q9UBS3 223 aa17.86■□□□□ 0.45
CLIP2-201ENST00000223398 DIRAS1O95057 198 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 GP1BBP13224 206 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 TMEM74Q96NL1 305 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 IL4I1Q96RQ9 567 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 M0QZQ0 153 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 OR2B3O76000 313 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 ADRB3P13945 408 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 FBLP22087 321 aaKnown RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 IQCF2Q8IXL9 164 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 PJA1Q8NG27 643 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 OR56A1Q8NGH5 318 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 CLCC1Q96S66 551 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 DPH7Q9BTV6 452 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 TMED5Q9Y3A6 229 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 CBX5P45973 191 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 GALNT10Q86SR1 603 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 AMIGO1Q86WK6 493 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 OR4K14Q8NGD5 310 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 OR6N1Q8NGY5 312 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 MCOLN1Q9GZU1 580 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 COQ10BQ9H8M1 238 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 CRYBG1Q9Y4K1 1723 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 MBLAC1A4D2B0 266 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 RPP14O95059 124 aaKnown RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 SERPINA3P01011 423 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 RGS21Q2M5E4 152 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 NPAS3Q8IXF0 933 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 NATD1Q8N6N6 113 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
CLIP2-201ENST00000223398 TPT1P8Q9HAU6 139 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 COMMD3-BMI1R4GMX3 469 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 A0A0U1RQS6 177 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 PGRP06401 933 aa17.85■□□□□ 0.45
CLIP2-201ENST00000223398 FMO3P31513 532 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms