RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ASAH2Q9NR71 780 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 MARCH5Q9NX47 278 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 GTSE1Q9NYZ3 720 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 NDUFAF1Q9Y375 327 aa13.19□□□□□ -0.3
GABPB1-201ENST00000220429 TP53BP1Q12888 1972 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 FXYD1O00168 92 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 WWP2O00308 870 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 GNB5O14775 395 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 IFNA7P01567 189 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 CD86P42081 329 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 GDI2P50395 445 aaKnown RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 PLIN5Q00G26 463 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 DSC2Q02487 901 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 RELQ04864 619 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 IL18R1Q13478 541 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 GPNMBQ14956 572 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 EML3Q32P44 896 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 LRRC8DQ7L1W4 858 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 CIR1Q86X95 450 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 NLGN4YQ8NFZ3 816 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 FATE1Q969F0 183 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 C19orf60Q96EN9 201 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 GPR78Q96P69 363 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 KCNS3Q9BQ31 491 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 ZCCHC4Q9H5U6 513 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 RNF167Q9H6Y7 350 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 MARCH2Q9P0N8 246 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 C3orf18Q9UK00 162 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 VPS9D1Q9Y2B5 631 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 ALG5Q9Y673 324 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 MTMR11A4FU01 709 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 MROH6A6NGR9 719 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 OR6C75A6NL08 312 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 WASHC1A8K0Z3 465 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 NR5A2O00482 541 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 NBNO60934 754 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 RPLP0P05388 317 aaKnown RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 TPOP07202 933 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 CPB1P15086 417 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 PAMP19021 973 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 HLA-FP30511 346 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 MTHFRP42898 656 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 KCNC1P48547 511 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 EPHA5P54756 1037 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 ITKQ08881 620 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 C10orf120Q5SQS8 335 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 MARC1Q5VT66 337 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 SPATA6LQ8N4H0 392 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 COQ8BQ96D53 544 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 CASD1Q96PB1 797 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 RHNO1Q9BSD3 238 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 PRKD2Q9BZL6 878 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 C11orf54Q9H0W9 315 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 TTYH1Q9H313 450 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 CCNB1IP1Q9NPC3 277 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.18□□□□□ -0.3
GABPB1-201ENST00000220429 PCDHA9Q9Y5H5 950 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 KCNMB2Q9Y691 235 aa13.18□□□□□ -0.3
GABPB1-201ENST00000220429 BCKDKO14874 412 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 AZGP1P25311 298 aaKnown RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 KIR2DL3P43628 341 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 TAS2R39P59534 338 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 PLD1Q13393 1074 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 RAPSNQ13702 412 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF789Q5FWF6 425 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 SLC35F1Q5T1Q4 408 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 KDM4DQ6B0I6 523 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 TEX26Q8N6G2 289 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ATG16L2Q8NAA4 619 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 DBF4BQ8NFT6 615 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 SEPT5Q99719 369 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■□□ 14.7
GABPB1-201ENST00000220429 ESRP2Q9H6T0 727 aaKnown RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 HEXA-AS1Q9H8Q6 139 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 MEAF6Q9HAF1 191 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 MCUBQ9NWR8 336 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 XPR1Q9UBH6 696 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 UBQLN2Q9UHD9 624 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 NT5C1B-RDH14C9J2C7 533 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ABCD4O14678 606 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 HRO43593 1189 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 HS6ST1O60243 411 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 IGLV3-27P01718 113 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 SERPINF2P08697 491 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ACSM4P0C7M7 580 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 BMP8BP34820 402 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 PBX3P40426 434 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms