RNA–Protein interactions for RNA: ENST00000641944.1

CASC19-267, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 1,117 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-267	ENST00000641944	RBM41	Q96IZ5	413 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	EPSTI1	Q96J88	318 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	C4orf45	Q96LM5	186 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	SLC39A8	Q9C0K1	460 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	SHARPIN	Q9H0F6	387 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	ABCG8	Q9H221	673 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	RAVER2	Q9HCJ3	691 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	PRMT8	Q9NR22	394 aa	Predicted RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	FLRT3	Q9NZU0	649 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	SLC12A6	Q9UHW9	1150 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	ISY1	Q9ULR0	285 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	AGTPBP1	Q9UPW5	1226 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	TDRKH	Q9Y2W6	561 aa	Known RBP	4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	TEX264	Q9Y6I9	313 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	KIF21A	Q7Z4S6	1674 aa		4.54	□□□□□ -1.68
CASC19-267	ENST00000641944	C19orf81	C9J6K1	198 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944		E5RGE8	158 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ACOT8	O14734	319 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	SLC22A2	O15244	555 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ACSL4	O60488	711 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	DFFB	O76075	338 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	CAVIN2	O95810	425 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	CD59	P13987	128 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	CPA3	P15088	417 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	GOT1	P17174	413 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	MARK3	P27448	753 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	CEACAM8	P31997	349 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	DCT	P40126	519 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	SMS	P52788	366 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	CASP9	P55211	416 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	IL1RL1	Q01638	556 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ILF3	Q12906	894 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	STXBP2	Q15833	593 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ACCSL	Q4AC99	568 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ZNF585B	Q52M93	769 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	SLC25A53	Q5H9E4	307 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	WDR38	Q5JTN6	314 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	LCN1P1	Q5VSP4	162 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	UGT3A1	Q6NUS8	523 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ZNF410	Q86VK4	478 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	TMEM126B	Q8IUX1	230 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	RCOR2	Q8IZ40	523 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ZNF843	Q8N446	348 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	PIK3R3	Q92569	461 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	FAM46B	Q96A09	425 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	BTBD9	Q96Q07	612 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	RUFY1	Q96T51	708 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	CDCA3	Q99618	268 aa	Predicted RBP	4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	PRMT1	Q99873	361 aa	Known RBP	4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	NACAP1	Q9BZK3	213 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	MAGEF1	Q9HAY2	307 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	EXOC6B	Q9Y2D4	811 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	ZNF510	Q9Y2H8	683 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	NSG2	Q9Y328	171 aa		4.53	□□□□□ -1.68
CASC19-267	ENST00000641944	TRBV5-5	A0A0J9YX44	114 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	MAGEB16	A2A368	324 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	KRT87P	A6NCN2	255 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944		H3BMM5	538 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	BUB3	O43684	328 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	GLRA3	O75311	464 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	CRYAA	P02489	173 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	ABHD2	P08910	425 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	MAPK3	P27361	379 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	FOXG1	P55316	489 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	CLDN17	P56750	224 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	STARD6	P59095	220 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	MYL7	Q01449	175 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	WASHC5	Q12768	1159 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	HNRNPA0	Q13151	305 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	RBM39	Q14498	530 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	ZNF542P	Q5EBM4	170 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	GDPD4	Q6W3E5	623 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	G2E3	Q7L622	706 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	ZDHHC17	Q8IUH5	632 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	TDH	Q8IZJ6	230 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	OR7A2P	Q8NGA2	310 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	OR4C15	Q8NGM1	316 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	RFT1	Q96AA3	541 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	MARK4	Q96L34	752 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	RUNDC3B	Q96NL0	473 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	DDX50	Q9BQ39	737 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	FSD1	Q9BTV5	496 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	RPF1	Q9H9Y2	349 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	PPAN	Q9NQ55	473 aa	Known RBP	4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	TMOD3	Q9NYL9	352 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	MAN1B1	Q9UKM7	699 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	KCNK6	Q9Y257	313 aa		4.52	□□□□□ -1.69
CASC19-267	ENST00000641944	IGHV4-61	A0A0C4DH41	118 aa		4.51	□□□□□ -1.69
CASC19-267	ENST00000641944	RNF103-CHMP3	A0A140T963	221 aa		4.51	□□□□□ -1.69
CASC19-267	ENST00000641944	ANTXRL	A6NF34	631 aa		4.51	□□□□□ -1.69
CASC19-267	ENST00000641944	SLC9B1P1	A6NJY1	282 aa		4.51	□□□□□ -1.69
CASC19-267	ENST00000641944	RNF103	O00237	685 aa		4.51	□□□□□ -1.69
CASC19-267	ENST00000641944	FPGT	O14772	594 aa		4.51	□□□□□ -1.69
CASC19-267	ENST00000641944	EPHB6	O15197	1021 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms