RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 NCEH1Q6PIU2 408 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ENPP6Q6UWR7 440 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 FAM151BQ6UXP7 276 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 PLEKHG7Q6ZR37 379 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF621Q6ZSS3 439 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 PAGE2Q7Z2X7 111 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TRIM46Q7Z4K8 759 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 SERPINA11Q86U17 422 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 DCP2Q8IU60 420 aaKnown RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ZZZ3Q8IYH5 903 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TAGAPQ8N103 731 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 CFAP52Q8N1V2 620 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ESX1Q8N693 406 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 OR2T11Q8NH01 316 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 SLC38A4Q969I6 547 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ISG20Q96AZ6 181 aaKnown RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TESCQ96BS2 214 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 EXOC2Q96KP1 924 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 CDK15Q96Q40 435 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 CPPED1Q9BRF8 314 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 RACGAP1Q9H0H5 632 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 FBXO8Q9NRD0 319 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TMEM161AQ9NX61 479 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 INTS6Q9UL03 887 aaKnown RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 PCDHGC4Q9Y5F7 938 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 DENND4AQ7Z401 1863 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 C5orf42Q9H799 3197 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 MTMR11A4FU01 709 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 MGAT4DA6NG13 374 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 CLDN24A6NM45 220 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 MAGEB17A8MXT2 336 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 M0QX08 132 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 AIREO43918 545 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 JRKO75564 520 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 SERPINB7O75635 380 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 RPLP0P05388 317 aaKnown RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 BCKDHAP12694 445 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 HSD3B1P14060 373 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 JUNDP17535 347 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ITGB6P18564 788 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 HSD3B2P26439 372 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 PRDX3P30048 256 aaKnown RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 RRM2P31350 389 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TIE1P35590 1138 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 IL12RB1P42701 662 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ALDH9A1P49189 494 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 HTR6P50406 440 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 PPP5CP53041 499 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 IRF8Q02556 426 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 KCNC3Q14003 757 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 DMC1Q14565 340 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 OXA1LQ15070 435 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 PROX2Q3B8N5 592 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 GGTA1PQ4G0N0 100 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 SYTL3Q4VX76 610 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 FBXO48Q5FWF7 155 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 LRIF1Q5T3J3 769 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 AGAP7PQ5VUJ5 663 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 MACC1Q6ZN28 852 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 CHST15Q7LFX5 561 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 LACC1Q8IV20 430 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 CCDC103Q8IW40 242 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ZNF557Q8N988 423 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 C11orf65Q8NCR3 313 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ST13P5Q8NFI4 369 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 OR6Q1Q8NGQ2 317 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TMEM169Q96HH4 297 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 Q96MT0 163 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TMEM175Q9BSA9 504 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TTPALQ9BTX7 342 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 NAA50Q9GZZ1 169 aaKnown RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 TBC1D17Q9HA65 648 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 DYRK4Q9NR20 520 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 ZDHHC3Q9NYG2 299 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 VAPAQ9P0L0 249 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 IL17CQ9P0M4 197 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 KLHL3Q9UH77 587 aa3.86□□□□□ -1.79
SCN1A-214ENST00000637038 MUC22E2RYF6 1773 aaPredicted RBP3.86□□□□□ -1.79
SCN1A-214ENST00000637038 KRBA1A5PL33 1030 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 EFCAB10A6NFE3 127 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 OR1I1O60431 355 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 INMTO95050 263 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 PGLSO95336 258 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 WISP1O95388 367 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 CPSF4O95639 269 aaKnown RBP3.85□□□□□ -1.79
SCN1A-214ENST00000637038 TBX18O95935 607 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 PTTG1O95997 202 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 INHBBP09529 407 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 MPC1LP0DKB6 136 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 IRF1P10914 325 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 CD36P16671 472 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 FUT4P22083 530 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 XPAP23025 273 aaPredicted RBP3.85□□□□□ -1.79
SCN1A-214ENST00000637038 RPL10P27635 214 aaKnown RBP3.85□□□□□ -1.79
SCN1A-214ENST00000637038 CTSKP43235 329 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 RPIAP49247 311 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 PRIM2P49643 509 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 GPR15P49685 360 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 CLCN7P51798 805 aa3.85□□□□□ -1.79
SCN1A-214ENST00000637038 TEKQ02763 1124 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms