RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	TNFRSF12A	Q9NP84	129 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	EXD2	Q9NVH0	621 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MED9	Q9NWA0	146 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MUTYH	Q9UIF7	546 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	GPR45	Q9Y5Y3	372 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	ALG5	Q9Y673	324 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306		U3KQV3	271 aa		10.44	□□□□□ -0.74
CHD2-223	ENST00000636306	MYO18A	Q92614	2054 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	VWA8	A3KMH1	1905 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	BTN3A1	O00481	513 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	ABCD4	O14678	606 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	MUSK	O15146	869 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	RNGTT	O60942	597 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	SLC43A1	O75387	559 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	TNFRSF21	O75509	655 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	RHOBTB1	O94844	696 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	SCEL	O95171	688 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	OR4Q2	P0C623	313 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	IGFBP5	P24593	272 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	ARPP19	P56211	112 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	GPR17	Q13304	367 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	BTN1A1	Q13410	526 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	BAK1	Q16611	211 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	LAIR1	Q6GTX8	287 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	FUT10	Q6P4F1	479 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	SHQ1	Q6PI26	577 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	PLET1	Q6UQ28	207 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	LIPI	Q6XZB0	460 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	RRM2B	Q7LG56	351 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	OVCH2	Q7RTZ1	564 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	CNTN4	Q8IWV2	1026 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	DTWD1	Q8N5C7	304 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	DUSP18	Q8NEJ0	188 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	OR8K3	Q8NH51	312 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	FRS2	Q8WU20	508 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	BTN2A2	Q8WVV5	523 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	NXPE3	Q969Y0	559 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	PITX2	Q99697	317 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	OMD	Q99983	421 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	RACGAP1	Q9H0H5	632 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	C11orf54	Q9H0W9	315 aa	Predicted RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	PPIL3	Q9H2H8	161 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	ACTR8	Q9H981	624 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	TMEM248	Q9NWD8	314 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	UBQLN2	Q9UHD9	624 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	KIF25	Q9UIL4	384 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	AGO1	Q9UL18	857 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	NDRG4	Q9ULP0	352 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	COPS3	Q9UNS2	423 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	SNX10	Q9Y5X0	201 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	HS3ST4	Q9Y661	456 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	RNF215	Q9Y6U7	377 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306		V9GYQ6	96 aa		10.43	□□□□□ -0.74
CHD2-223	ENST00000636306	NYNRIN	Q9P2P1	1898 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	IFRD1	O00458	451 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CD3EAP	O15446	510 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MAFK	O60675	156 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SNAPIN	O95295	136 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	DNTT	P04053	509 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	NCF1	P14598	390 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	KIR2DL3	P43628	341 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CCT3	P49368	545 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CLCNKA	P51800	687 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PCDH1	Q08174	1060 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ELOA	Q14241	798 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ZMYND11	Q15326	602 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	HSD17B12	Q53GQ0	312 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	RUNDC3A	Q59EK9	446 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	LRRC66	Q68CR7	880 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FCRLB	Q6BAA4	426 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MZT2B	Q6NZ67	158 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	C19orf48	Q6RUI8	117 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	TRIM48	Q8IWZ4	208 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FAM126B	Q8IXS8	530 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	HEXDC	Q8WVB3	486 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	OVCA2	Q8WZ82	227 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ELMO1	Q92556	727 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	YIPF5	Q969M3	257 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	COQ8B	Q96D53	544 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	RPL10L	Q96L21	214 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	C3orf30	Q96M34	536 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306		Q96MT0	163 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	COL21A1	Q96P44	957 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	TBCD	Q9BTW9	1192 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	HTATIP2	Q9BUP3	242 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	NMUR1	Q9HB89	426 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	INTS7	Q9NVH2	962 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MARCH2	Q9P0N8	246 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	PKP3	Q9Y446	797 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	SESN1	Q9Y6P5	492 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FAM95C	A0A1B0GW59	222 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	CIB4	A0PJX0	185 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	FAM234B	A2RU67	622 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	MTMR11	A4FU01	709 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	ASPDH	A6ND91	283 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	WASHC1	A8K0Z3	465 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	KRBOX1	C9JBD0	128 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306		F8W036	122 aa		10.42	□□□□□ -0.74
CHD2-223	ENST00000636306	KIAA0513	O60268	411 aa		10.42	□□□□□ -0.74

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