RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GRK6P43250 576 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 ZFP36L2P47974 494 aaKnown RBP12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 AGTR2P50052 363 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 NXPH1P58417 271 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 ACSM2AQ08AH3 577 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 BCL7AQ4VC05 210 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 ACSM2BQ68CK6 577 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 ABI3BPQ7Z7G0 1075 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 DHFR2Q86XF0 187 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 RNF148Q8N7C7 305 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 IL1RL2Q9HB29 575 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 NFKBIL1Q9UBC1 381 aaPredicted RBP12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC17A4Q9Y2C5 497 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 PCDHB11Q9Y5F2 797 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 DNAJC15Q9Y5T4 150 aa12.02□□□□□ -0.49
SYNGAP1-207ENST00000628646 CCDC154A6NI56 674 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 ARHGEF33A8MVX0 844 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 E7ENX8 843 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 H7BY64 318 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 DENRO43583 198 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 NOL3O60936 208 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 SEC22BO75396 215 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 SMIM18P0DKX4 95 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 GPX3P22352 226 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PSMA4P25789 261 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 ALDH9A1P49189 494 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PFN3P60673 137 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PLD3Q8IV08 490 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 CHCHD4Q8N4Q1 142 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR52E1Q8NGJ3 308 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 ZCCHC10Q8TBK6 192 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRAP1Q96NZ9 151 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 CDK15Q96Q40 435 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 GFM1Q96RP9 751 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 LRRC61Q9BV99 259 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 TRBV5-4A0A0C4DH59 114 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 DNAJA2O60884 412 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 C8BP07358 591 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 FGF4P08620 206 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 CD9P21926 228 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 B4GALNT1Q00973 533 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PAOXQ6QHF9 649 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR9I1Q8NGQ6 314 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 CNDP2Q96KP4 475 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 BTBD9Q96Q07 612 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 RMND5AQ9H871 391 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 AURKCQ9UQB9 309 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PTGDR2Q9Y5Y4 395 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 ST14Q9Y5Y6 855 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 KRT87PA6NCN2 255 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRORSD1PA6NEY8 169 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 CLDN9O95484 217 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 ZCCHC18P0CG32 403 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 JUPP14923 745 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 MRPS22P82650 360 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 REP15Q6BDI9 236 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 FAM83HQ6ZRV2 1179 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 IFNEQ86WN2 208 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 BHLHE22Q8NFJ8 381 aaPredicted RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 DUS3LQ96G46 650 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PKP4Q99569 1192 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 PKP2Q99959 881 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 GPATCH1Q9BRR8 931 aaKnown RBP12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 DPY30Q9C005 99 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 TMEM181Q9P2C4 612 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 KLHL20Q9Y2M5 609 aa12.01□□□□□ -0.49
SYNGAP1-207ENST00000628646 ATP6AP2A0A1C7CYW4 349 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 AKAP10O43572 662 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 ATP6AP2O75787 350 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 PIAS2O75928 621 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 OR4F21O95013 312 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 TSPAN12O95859 305 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 CSF2P04141 144 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 JMJD7P0C870 316 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 ATP4BP51164 291 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 NME5P56597 212 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 SKP1P63208 163 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 MEF2AQ02078 507 aaPredicted RBP12□□□□□ -0.49
SYNGAP1-207ENST00000628646 BNIP2Q12982 314 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 TRIM73Q86UV7 250 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 PLXDC1Q8IUK5 500 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 ROPN1LQ96C74 230 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 NSUN5Q96P11 429 aaKnown RBP12□□□□□ -0.49
SYNGAP1-207ENST00000628646 PRPF18Q99633 342 aaKnown RBP12□□□□□ -0.49
SYNGAP1-207ENST00000628646 P2RY12Q9H244 342 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 TMEM74BQ9NUR3 256 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 GMPR2Q9P2T1 348 aaKnown RBP12□□□□□ -0.49
SYNGAP1-207ENST00000628646 ZNF225Q9UK10 706 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 SPINT1O43278 529 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 RETP07949 1114 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 CCR8P51685 355 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 CLCN7P51798 805 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 TBPL1P62380 186 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLBPQ14493 270 aaKnown RBP eCLIP12□□□□□ -0.49
SYNGAP1-207ENST00000628646 METRNLQ641Q3 311 aa12□□□□□ -0.49
SYNGAP1-207ENST00000628646 MARVELD2Q8N4S9 558 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms