RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 PMP22Q01453 160 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 GPS1Q13098 491 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 CTBP1Q13363 440 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 PTK6Q13882 451 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 ACER2Q5QJU3 275 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 ARMC3Q5W041 872 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 FCRLBQ6BAA4 426 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 BNC2Q6ZN30 1099 aaPredicted RBP16.88■□□□□ 0.29
SMN2-213ENST00000614240 LANCL3Q6ZV70 420 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 BEST3Q8N1M1 668 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 CCDC177Q9NQR7 707 aaPredicted RBP16.88■□□□□ 0.29
SMN2-213ENST00000614240 FBXO6Q9NRD1 293 aaPredicted RBP16.88■□□□□ 0.29
SMN2-213ENST00000614240 KLHL42Q9P2K6 505 aa16.88■□□□□ 0.29
SMN2-213ENST00000614240 MYO7BQ6PIF6 2116 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 MAGEB16A2A368 324 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 SDR42E2A6NKP2 422 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 FAM227AF5H4B4 570 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 NSA2O95478 260 aaKnown RBP16.87■□□□□ 0.29
SMN2-213ENST00000614240 MLYCDO95822 493 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 CYC1P08574 325 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 IL1RNP18510 177 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 EFNA3P52797 238 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 ACTN3Q08043 901 aaPredicted RBP16.87■□□□□ 0.29
SMN2-213ENST00000614240 ZXDCQ2QGD7 858 aaPredicted RBP16.87■□□□□ 0.29
SMN2-213ENST00000614240 PLAG1Q6DJT9 500 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 UBE2R2Q712K3 238 aaPredicted RBP16.87■□□□□ 0.29
SMN2-213ENST00000614240 PRSS41Q7RTY9 318 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 GDF7Q7Z4P5 450 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 GIMAP7Q8NHV1 300 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 KCNJ9Q92806 393 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 MAGED4Q96JG8 741 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 GPR21Q99679 349 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 MACROD1Q9BQ69 325 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 UTP23Q9BRU9 249 aaKnown RBP16.87■□□□□ 0.29
SMN2-213ENST00000614240 ANKHQ9HCJ1 492 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 LZTFL1Q9NQ48 299 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 KLHL1Q9NR64 748 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 DHRS7Q9Y394 339 aa16.87■□□□□ 0.29
SMN2-213ENST00000614240 LRBAP50851 2863 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 FAM237BA0A1B0GVD1 139 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 GFYI3L273 518 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 SGK494L7N484 410 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 SLC19A2O60779 497 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 IMPA1P29218 277 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 PTGER4P35408 488 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 SKIV2L2P42285 1042 aaKnown RBP16.86■□□□□ 0.29
SMN2-213ENST00000614240 AGTR2P50052 363 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 EXT1Q16394 746 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 ZNF630Q2M218 657 aaPredicted RBP16.86■□□□□ 0.29
SMN2-213ENST00000614240 XKRXQ6PP77 449 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 ANKRD37Q7Z713 158 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 LRRC56Q8IYG6 542 aaPredicted RBP16.86■□□□□ 0.29
SMN2-213ENST00000614240 CPNE9Q8IYJ1 553 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 CAMKVQ8NCB2 501 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 ZCCHC10Q8TBK6 192 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
SMN2-213ENST00000614240 THAP11Q96EK4 314 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 PCBD2Q9H0N5 130 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 ANKRD10Q9NXR5 420 aa16.86■□□□□ 0.29
SMN2-213ENST00000614240 KCNE1BA0A087WTH5 132 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 OR2W5A6NFC9 320 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 GOLGA8MH3BSY2 632 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 KIF5CO60282 957 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 KRT14P02533 472 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 CDC25BP30305 580 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 BCL6P41182 706 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 SMSP52788 366 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 TBPL1P62380 186 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 SNRPNP63162 240 aaKnown RBP16.85■□□□□ 0.29
SMN2-213ENST00000614240 ALDH6A1Q02252 535 aaKnown RBP16.85■□□□□ 0.29
SMN2-213ENST00000614240 TUBA3CQ13748 450 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 MEP1AQ16819 746 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 ANKRD22Q5VYY1 191 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 ZNF549Q6P9A3 640 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 TUBA3EQ6PEY2 450 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 CYHR1Q6ZMK1 362 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 PIWIL4Q7Z3Z4 852 aaKnown RBP16.85■□□□□ 0.29
SMN2-213ENST00000614240 VN1R4Q7Z5H5 301 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 CAND1Q86VP6 1230 aaKnown RBP16.85■□□□□ 0.29
SMN2-213ENST00000614240 C17orf64Q86WR6 236 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 SPNS2Q8IVW8 549 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 PALM2Q8IXS6 379 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 CALML6Q8TD86 181 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 C20orf96Q9NUD7 363 aaPredicted RBP16.85■□□□□ 0.29
SMN2-213ENST00000614240 MAD1L1Q9Y6D9 718 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 COMMD10Q9Y6G5 202 aa16.85■□□□□ 0.29
SMN2-213ENST00000614240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 FEZF1A0PJY2 475 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 MLNP12872 115 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 CD46P15529 392 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 EEF1DP29692 281 aaKnown RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 CXCR5P32302 372 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 GRK3P35626 688 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 CD96P40200 585 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 SLC1A2P43004 574 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 ST13P50502 369 aaKnown RBP16.84■□□□□ 0.29
SMN2-213ENST00000614240 TAS2R50P59544 299 aa16.84■□□□□ 0.29
SMN2-213ENST00000614240 OC90Q02509 493 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms