RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 HMGCLL1Q8TB92 370 aa20.78■□□□□ 0.92
CBWD3-207ENST00000611426 NACC2Q96BF6 587 aa20.78■□□□□ 0.92
CBWD3-207ENST00000611426 CABS1Q96KC9 395 aa20.78■□□□□ 0.92
CBWD3-207ENST00000611426 PSMG3-AS1Q96PY0 264 aa20.78■□□□□ 0.92
CBWD3-207ENST00000611426 WDR54Q9H977 334 aa20.78■□□□□ 0.92
CBWD3-207ENST00000611426 NBPF19A0A087WUL8 3843 aa20.78■□□□□ 0.92
CBWD3-207ENST00000611426 MASP2O00187 686 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 SRPX2O60687 465 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 CTSVO60911 334 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 AGFG2O95081 481 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ONECUT2O95948 504 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 CRHR1P34998 444 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 RPA3P35244 121 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 SLC1A2P43004 574 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ETV4P43268 484 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 SERPINB8P50452 374 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 VSX2P58304 361 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 NKG7Q16617 165 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 PLEKHN1Q494U1 663 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 WASHC2DQ5SRD0 308 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ZNF470Q6ECI4 717 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 RGS9BPQ6ZS82 235 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 LCA5Q86VQ0 697 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 CILP2Q8IUL8 1156 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 OR2L3Q8NG85 312 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 CKAP2Q8WWK9 683 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ZNF285Q96NJ3 590 aa20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ZNF552Q9H707 407 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 CORO1CQ9ULV4 474 aaPredicted RBP20.77■□□□□ 0.92
CBWD3-207ENST00000611426 ESPL1Q14674 2120 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 FITM1A5D6W6 292 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 SPAG7O75391 227 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 IPO13O94829 963 aaKnown RBP20.76■□□□□ 0.91
CBWD3-207ENST00000611426 MATN4O95460 622 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 AHSGP02765 367 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 MMP11P24347 488 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 OR1D4P47884 311 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 ADARP55265 1226 aaKnown RBP20.76■□□□□ 0.91
CBWD3-207ENST00000611426 SOX8P57073 446 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 IGFL3Q6UXB1 125 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 METTL27Q8N6F8 245 aaPredicted RBP20.76■□□□□ 0.91
CBWD3-207ENST00000611426 OR2A1Q8NGT9 310 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 SLC29A3Q9BZD2 475 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 SLC26A1Q9H2B4 701 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 ENAMQ9NRM1 1142 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 SPATA7Q9P0W8 599 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 B3GNT3Q9Y2A9 372 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 KLK4Q9Y5K2 254 aa20.76■□□□□ 0.91
CBWD3-207ENST00000611426 SPTAN1Q13813 2472 aaKnown RBP20.76■□□□□ 0.91
CBWD3-207ENST00000611426 A0A0J9YVX5 310 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 HYKKA2RU49 373 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 TCP11X1B4DZS4 312 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 E5RI56 91 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 COPEO14579 308 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 ITGA3P26006 1051 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 AIMP2Q13155 320 aaKnown RBP20.75■□□□□ 0.91
CBWD3-207ENST00000611426 FASTKQ14296 549 aaKnown RBP20.75■□□□□ 0.91
CBWD3-207ENST00000611426 GBX1Q14549 363 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 FRMPD2BQ6IN97 320 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 SHISA6Q6ZSJ9 500 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 COX15Q7KZN9 410 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 DENND6AQ8IWF6 608 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 TCP10LQ8TDR4 215 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 TM9SF4Q92544 642 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 ZNF317Q96PQ6 595 aaPredicted RBP20.75■□□□□ 0.91
CBWD3-207ENST00000611426 SOX17Q9H6I2 414 aaPredicted RBP20.75■□□□□ 0.91
CBWD3-207ENST00000611426 GALPQ9UBC7 116 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 MTO1Q9Y2Z2 717 aaKnown RBP20.75■□□□□ 0.91
CBWD3-207ENST00000611426 PLLPQ9Y342 182 aa20.75■□□□□ 0.91
CBWD3-207ENST00000611426 PCM1Q15154 2024 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 A0A1W2PPV9 198 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 EIF2S1P05198 315 aaKnown RBP20.74■□□□□ 0.91
CBWD3-207ENST00000611426 GSTA1P08263 222 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 PKMP14618 531 aaKnown RBP20.74■□□□□ 0.91
CBWD3-207ENST00000611426 CMPK1P30085 196 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 CCT5P48643 541 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 CTBP1Q13363 440 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 ZKSCAN8Q15776 578 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-207ENST00000611426 ACSBG2Q5FVE4 666 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 CCDC91Q7Z6B0 441 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 ZADH2Q8N4Q0 377 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 ANKRD42Q8N9B4 389 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 OR9A1PQ8NGU1 263 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 C19orf60Q96EN9 201 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 SPSB2Q99619 263 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 ACAT2Q9BWD1 397 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 ILKAPQ9H0C8 392 aaPredicted RBP20.74■□□□□ 0.91
CBWD3-207ENST00000611426 VPS11Q9H270 941 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 SNX15Q9NRS6 342 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 FBXL4Q9UKA2 621 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 NXT1Q9UKK6 140 aaKnown RBP20.74■□□□□ 0.91
CBWD3-207ENST00000611426 VPS9D1Q9Y2B5 631 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 MAU2Q9Y6X3 613 aa20.74■□□□□ 0.91
CBWD3-207ENST00000611426 LOC105369274A0A096LPK9 316 aa20.73■□□□□ 0.91
CBWD3-207ENST00000611426 LOC102723532A0A0G2JNH3 316 aa20.73■□□□□ 0.91
CBWD3-207ENST00000611426 GOLGA8RI6L899 631 aa20.73■□□□□ 0.91
CBWD3-207ENST00000611426 GLRA3O75311 464 aa20.73■□□□□ 0.91
CBWD3-207ENST00000611426 YBX1P67809 324 aaKnown RBP20.73■□□□□ 0.91
CBWD3-207ENST00000611426 MPP1Q00013 466 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms