RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 CPNE9Q8IYJ1 553 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 MCUQ8NE86 351 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 OR51Q1Q8NH59 317 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 DNAJB8Q8NHS0 232 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 CD200R1Q8TD46 325 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 RNF32Q9H0A6 362 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 C20orf96Q9NUD7 363 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 ABI3Q9P2A4 366 aa12.66□□□□□ -0.38
POLR2J3-219ENST00000608621 KCNE1BA0A087WTH5 132 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 LCMT2O60294 686 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 PRAMEF2O60811 474 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 WISP2O76076 250 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 SEC24DO94855 1032 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 NSA2O95478 260 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 CRYABP02511 175 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 MYBL2P10244 700 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 PRF1P14222 555 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 HRH2P25021 359 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 SLC1A2P43004 574 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 RPS15AP62244 130 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 CSNK1G2P78368 415 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 BTBD16Q32M84 506 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 MINDY4Q4G0A6 757 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 MCOLN3Q8TDD5 553 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 TM4SF19Q96DZ7 209 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 UNKQ9C0B0 810 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 XAB2Q9HCS7 855 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 CCDC177Q9NQR7 707 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 HCN3Q9P1Z3 774 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 SEC14L3Q9UDX4 400 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 FBXO5Q9UKT4 447 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 MAD1L1Q9Y6D9 718 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 COMMD10Q9Y6G5 202 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 CPAMD8Q8IZJ3 1885 aa12.65□□□□□ -0.38
POLR2J3-219ENST00000608621 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 SGK494L7N484 410 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 CCL21O00585 134 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 IL1RNP18510 177 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 BCL6P41182 706 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 XCR1P46094 333 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 TBPL1P62380 186 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 MPP1Q00013 466 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 PTK6Q13882 451 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 FCRLBQ6BAA4 426 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 TMEM214Q6NUQ4 689 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ANKRD37Q7Z713 158 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 SLC26A11Q86WA9 606 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 AGGF1Q8N302 714 aaeCLIP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 KCT2Q8NC54 265 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 CAMKVQ8NCB2 501 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 CALML6Q8TD86 181 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 EEF1AKMT1Q8WVE0 214 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ALKBH8Q96BT7 664 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 THAP11Q96EK4 314 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 MS4A14Q96JA4 679 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ZNF354BQ96LW1 612 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 CCDC138Q96M89 665 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 AARSD1Q9BTE6 412 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ATG10Q9H0Y0 220 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 IARS2Q9NSE4 1012 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 C19orf25Q9UFG5 118 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ADAMTS6Q9UKP5 1117 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 SH2B3Q9UQQ2 575 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 PDE10AQ9Y233 779 aa12.64□□□□□ -0.39
POLR2J3-219ENST00000608621 ABCA12Q86UK0 2595 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 CYC1P08574 325 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 GRNP28799 593 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 MAGEA3P43357 314 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 TIAL1Q01085 375 aaKnown RBP eCLIP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 PMP22Q01453 160 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 ART3Q13508 389 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 NAE1Q13564 534 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 NAA30Q147X3 362 aaPredicted RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 ZNF766Q5HY98 468 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 ACER2Q5QJU3 275 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 PLAG1Q6DJT9 500 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 H3F3CQ6NXT2 135 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 AGTRAPQ6RW13 159 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 MBOAT1Q6ZNC8 495 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 MRGPRGQ86SM5 289 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 C17orf64Q86WR6 236 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 MCEMP1Q8IX19 187 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 RASGEF1CQ8N431 466 aa12.63□□□□□ -0.39
POLR2J3-219ENST00000608621 ZCCHC10Q8TBK6 192 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms