RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SLC13A3Q8WWT9 602 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 MTFMTQ96DP5 389 aaKnown RBP11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 MTERF3Q96E29 417 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 APIPQ96GX9 242 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TEX37Q96LM6 180 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 APOLD1Q96LR9 279 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 QRFPRQ96P65 431 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 NPAS2Q99743 824 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 LRRC61Q9BV99 259 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 MS4A8Q9BY19 250 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 MUC13Q9H3R2 512 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 RMND5AQ9H871 391 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TMEM181Q9P2C4 612 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 MAP10Q9P2G4 905 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SUCOQ9UBS9 1254 aaKnown RBP11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SUSD2Q9UGT4 822 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 DLGAP4Q9Y2H0 992 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 CSNK1G3Q9Y6M4 447 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PI4KAP42356 2102 aa11.8□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 LILRA5A6NI73 299 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 FXYD1O00168 92 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TRIM38O00635 465 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 BCAT2O15382 392 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TBX19O60806 448 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ATP6V1G2O95670 118 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PGRP06401 933 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 HSD17B1P14061 328 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ME2P23368 584 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 HOXD12P35452 270 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 RPS15AP62244 130 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 RPS13P62277 151 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TRA2BP62995 288 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TRAP1Q12931 704 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PTGR1Q14914 329 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SLC5A12Q1EHB4 618 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ADPRMQ3LIE5 342 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 VPS26BQ4G0F5 336 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 DEPDC1Q5TB30 811 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 KHDRBS2Q5VWX1 349 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 FAM219BQ5XKK7 198 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 AAGABQ6PD74 315 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 R3HCC1LQ7Z5L2 792 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 RETREG3Q86VR2 466 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 C17orf82Q86X59 251 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 NAGSQ8N159 534 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 NATD1Q8N6N6 113 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SRFBP1Q8NEF9 429 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TRPV3Q8NET8 790 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 OR8J3Q8NGG0 315 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 LRRC58Q96CX6 371 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 MYNNQ9NPC7 610 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 CUEDC1Q9NWM3 386 aaPredicted RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 FAM120CQ9NX05 1096 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 GMEB1Q9Y692 573 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 AP1M2Q9Y6Q5 423 aa11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.79□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 IGKV1-8A0A0C4DH67 115 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ASPDHA6ND91 283 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 C2orf74A8MZ97 194 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 LMO7DNF2Z398 122 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PCDH7O60245 1069 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 FKBP6O75344 327 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ERN1O75460 977 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PSMB5P28074 263 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PEBP1P30086 187 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 CNR2P34972 360 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 HPCAL1P37235 193 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PXNP49023 591 aaPredicted RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 RAE1P78406 368 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PWP1Q13610 501 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 DDX39BQ13838 428 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 NFYCQ13952 458 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 GPR18Q14330 331 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PLCL1Q15111 1095 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ZIC1Q15915 447 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TIGD2Q4W5G0 525 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PRRT3Q5FWE3 981 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 LRIF1Q5T3J3 769 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 C1orf146Q5VVC0 180 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 KLHL35Q6PF15 583 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 OGFOD3Q6PK18 319 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 TMEM26Q6ZUK4 368 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 COMMD6Q7Z4G1 85 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 VN1R5Q7Z5H4 357 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 RABEPKQ7Z6M1 372 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PAQR7Q86WK9 346 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SYT12Q8IV01 421 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 C1orf52Q8N6N3 182 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ENDOVQ8N8Q3 282 aaKnown RBP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 GOLM1Q8NBJ4 401 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 FLVCR1-AS1Q8TAF5 88 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 SLC37A2Q8TED4 501 aa11.78□□□□□ -0.52
NEDD8-MDP1-203ENST00000604306 ZDHHC1Q8WTX9 485 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms