RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 NPIPA1Q9UND3 350 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CACNA1DQ01668 2161 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TRBV23OR9-2A0A075B6M9 112 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 A0A1W2PRB8 838 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF705EA8MWA4 302 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM150CB9EJG8 249 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SCDO00767 359 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HLA-DQB2P05538 268 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SEC23BQ15437 767 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 UGT8Q16880 541 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 FANK1Q8TC84 345 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ADAD1Q96M93 576 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 RANBP3Q9H6Z4 567 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ZCCHC3Q9NUD5 404 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TAS2R3Q9NYW6 316 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 DNAJC27Q9NZQ0 273 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PADI2Q9Y2J8 665 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ADGRB1O14514 1584 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TEX13DA0A0J9YY54 714 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TRBC2A0A5B9 178 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HERV-K104P61576 105 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HNRNPA0Q13151 305 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 FIP1L1Q6UN15 594 aaKnown RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TAC4Q86UU9 113 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 OR52E4Q8NGH9 312 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF420Q8TAQ5 688 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM80Q96HE8 168 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SYN3O14994 580 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ABCB7O75027 752 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CEACAM20Q6UY09 585 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PFDN5Q99471 154 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HTATIP2Q9BUP3 242 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 PREBQ9HCU5 417 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 MS4A12Q9NXJ0 267 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF226Q9NYT6 803 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TAS2R10Q9NYW0 307 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TMED5Q9Y3A6 229 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-217ENST00000602723 E7EQ34 232 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 M0R129 80 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ITM2AO43736 263 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SAMD12Q8N8I0 201 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF709Q8N972 641 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 TFAP2BQ92481 460 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 NUS1Q96E22 293 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 FBXL20Q96IG2 436 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CYP2S1Q96SQ9 504 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 HCN2Q9UL51 889 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 ODF4Q2M2E3 257 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 SLC29A3Q9BZD2 475 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
CSMD1-217ENST00000602723 KLRG2A4D1S0 409 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF670-ZNF695F2Z2N8 137 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 PLGP00747 810 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 RGPD2P0DJD1 1756 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 AOC1P19801 751 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 CTSOP43234 321 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TBRG1Q3YBR2 411 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ANKRD23Q86SG2 305 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 C4orf32Q8N8J7 132 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 OR56A1Q8NGH5 318 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 RNF121Q9H920 327 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ADAP2Q9NPF8 381 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 GPR89AB7ZAQ6 455 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 MT-ND5P03915 603 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 GPR89BP0CG08 455 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 GSK3BP49841 420 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 SLC18A1P54219 525 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 DPYSL2Q16555 572 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 DUSP28Q4G0W2 176 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 NFKBIDQ8NI38 313 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 DTLQ9NZJ0 730 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ACTR3BQ9P1U1 418 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM233B4DJY2 109 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ARL6IP5O75915 188 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TLE2Q04725 743 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ATXN7L3Q14CW9 347 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TMCO2Q7Z6W1 182 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 NIPA2Q8N8Q9 360 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TTYH2Q9BSA4 534 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 BEX2Q9BXY8 128 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 UCK2Q9BZX2 261 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 BEX1Q9HBH7 125 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TLX2O43763 284 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 NIPSNAP2O75323 286 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 NCEH1Q6PIU2 408 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 EPGNQ6UW88 154 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 MBOAT1Q6ZNC8 495 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 SLC24A5Q71RS6 500 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 SNX27Q96L92 541 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 EPYCQ99645 322 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TUBA1CQ9BQE3 449 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 CENPMQ9NSP4 180 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 STXBP5LQ9Y2K9 1186 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 OPN1SWP03999 348 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 MAT2AP31153 395 aaKnown RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 LILRA4P59901 499 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms