RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FBXO36Q8NEA4 188 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 OR11G2Q8NGC1 345 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PYCR2Q96C36 320 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 C19orf60Q96EN9 201 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 MMABQ96EY8 250 aaPredicted RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 FAM129AQ9BZQ8 928 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PARVBQ9HBI1 364 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 TRPC4Q9UBN4 977 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 C3orf18Q9UK00 162 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 NXT1Q9UKK6 140 aaKnown RBP13.08□□□□□ -0.32
SCAF1-203ENST00000598359 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 MAP4K5Q9Y4K4 846 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 CSAG2Q9Y5P2 127 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 ITPR2Q14571 2701 aa13.08□□□□□ -0.32
SCAF1-203ENST00000598359 PCM1Q15154 2024 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 H3BQF6 201 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 VPS4BO75351 444 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 C8GP07360 202 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 CDH1P12830 882 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 FDXRP22570 491 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 EFNA3P52797 238 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 IL2P60568 153 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 CSNK1G2P78368 415 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 DSG2Q14126 1118 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 ZNF460Q14592 562 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 TUBB8Q3ZCM7 444 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 TMEM207Q6UWW9 146 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 OR9A4Q8NGU2 314 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 GABPB2Q8TAK5 448 aaPredicted RBP13.07□□□□□ -0.32
SCAF1-203ENST00000598359 PNPLA2Q96AD5 504 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 DPH5Q9H2P9 285 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 ZNF160Q9HCG1 818 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 SEMA3GQ9NS98 782 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 UTP6Q9NYH9 597 aaKnown RBP13.07□□□□□ -0.32
SCAF1-203ENST00000598359 C5AR2Q9P296 337 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 VPS4AQ9UN37 437 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 VWA7Q9Y334 891 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 UTP11Q9Y3A2 253 aaKnown RBP13.07□□□□□ -0.32
SCAF1-203ENST00000598359 ANKRD12Q6UB98 2062 aa13.07□□□□□ -0.32
SCAF1-203ENST00000598359 NUP210LQ5VU65 1888 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ENO4A6NNW6 628 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 IDSB3KWA1 339 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 LCMT2O60294 686 aaKnown RBP13.06□□□□□ -0.32
SCAF1-203ENST00000598359 JRKO75564 520 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 GUCA1CO95843 209 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ALPPP05187 535 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ANXA5P08758 320 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ACPPP15309 386 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 SLC26A3P40879 764 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 BCL6P41182 706 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 EMP2P54851 167 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 EMP3P54852 163 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 SOX8P57073 446 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 MEF2AQ02078 507 aaPredicted RBP13.06□□□□□ -0.32
SCAF1-203ENST00000598359 EEF1A2Q05639 463 aaKnown RBP13.06□□□□□ -0.32
SCAF1-203ENST00000598359 SP140Q13342 867 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 GALNT7Q86SF2 657 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 C17orf64Q86WR6 236 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 CISD2Q8N5K1 135 aaKnown RBP13.06□□□□□ -0.32
SCAF1-203ENST00000598359 LRRC39Q96DD0 335 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 THOC3Q96J01 351 aaKnown RBP13.06□□□□□ -0.32
SCAF1-203ENST00000598359 PSMG3-AS1Q96PY0 264 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ERP44Q9BS26 406 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 DRC3Q9H069 523 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 TMEM184CQ9NVA4 438 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ARL15Q9NXU5 204 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 ZFATQ9P243 1243 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 CDC14AQ9UNH5 594 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 B3GNT3Q9Y2A9 372 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 DOPEY1Q5JWR5 2465 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 HEATR5BQ9P2D3 2071 aa13.06□□□□□ -0.32
SCAF1-203ENST00000598359 MDC1Q14676 2089 aaKnown RBP13.05□□□□□ -0.32
SCAF1-203ENST00000598359 IGLV3-12A0A075B6K2 115 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 CDC7O00311 574 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 SLC16A5O15375 505 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 HEXBP07686 556 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 CELA2AP08217 269 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 FAM153BP0C7A2 387 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 NPPBP16860 134 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 RELAQ04206 551 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 MGAT5Q09328 741 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 MRPL49Q13405 166 aaKnown RBP13.05□□□□□ -0.32
SCAF1-203ENST00000598359 FAM153CQ494X1 144 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 GARNL3Q5VVW2 1013 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 ATG9BQ674R7 924 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 FAM45BPQ6NSW5 357 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 LINC00696Q6ZRV3 163 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 STRA8Q7Z7C7 330 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 CUZD1Q86UP6 607 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 HPS6Q86YV9 775 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 ZC3H7AQ8IWR0 971 aaKnown RBP13.05□□□□□ -0.32
SCAF1-203ENST00000598359 ZBED8Q8IZ13 594 aa13.05□□□□□ -0.32
SCAF1-203ENST00000598359 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms