RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 WFS1O76024 890 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 CLDN9O95484 217 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 OTCP00480 354 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 STATHP02808 62 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 SERPIND1P05546 499 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 SLC5A2P31639 672 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 SCTRP47872 440 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 NAA20P61599 178 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 PCDH1Q08174 1060 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 PRAMEF17Q5VTA0 474 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 LIPJQ5W064 366 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 TLDC1Q6P9B6 456 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 MILR1Q7Z6M3 343 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 ZNF655Q8N720 491 aaPredicted RBP21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 CSNK1A1LQ8N752 337 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 OR52B6Q8NGF0 335 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 CDK15Q96Q40 435 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 NLNQ9BYT8 704 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 DRC3Q9H069 523 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 SYNPO2LQ9H987 977 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 THSD1Q9NS62 852 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 FOXJ2Q9P0K8 574 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 RNF11Q9Y3C5 154 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 PCDHGA4Q9Y5G9 962 aa21.14■□□□□ 0.97
CHMP2A-204ENST00000597848 PPP6CO00743 305 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 ZSCAN9O15535 394 aaPredicted RBP21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 DXOO77932 396 aaKnown RBP21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 TIAF1O95411 115 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 MLYCDO95822 493 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 NEFHP12036 1026 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 CD22P20273 847 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 HNF4AP41235 474 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 GRM7Q14831 915 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 IGF2-ASQ6U949 168 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 ASPGQ86U10 573 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 TTC29Q8NA56 475 aaPredicted RBP21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 PPP1R14CQ8TAE6 165 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 SLC13A3Q8WWT9 602 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 UBE2E3Q969T4 207 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 NTMT1Q9BV86 223 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 SARGQ9BW04 601 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 GATA5Q9BWX5 397 aaPredicted RBP21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 ULBP3Q9BZM4 244 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 B3GNT4Q9C0J1 378 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 PITHD1Q9GZP4 211 aaPredicted RBP21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 GSTO2Q9H4Y5 243 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 NT5DC2Q9H857 520 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 ASCL3Q9NQ33 180 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 PCDHGA7Q9Y5G6 932 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 AP1M2Q9Y6Q5 423 aa21.13■□□□□ 0.97
CHMP2A-204ENST00000597848 DCHS1Q96JQ0 3298 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 CDRT15L2A8MXV6 281 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 TXNDC9O14530 226 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 BIRC5O15392 142 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 ZNF749O43361 778 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 UGDHO60701 494 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 KIAA0754O94854 1291 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 NTRK1P04629 796 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 PCNAP12004 261 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 AHRP35869 848 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 SLC18A1P54219 525 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 CYP4F2P78329 520 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 LCP2Q13094 533 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 TRAF3Q13114 568 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 COL9A2Q14055 689 aaPredicted RBP21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 CPSF6Q16630 551 aaKnown RBP eCLIP21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 HSP90B2PQ58FF3 399 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 GRHL2Q6ISB3 625 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 MED27Q6P2C8 311 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 VN1R4Q7Z5H5 301 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 L3MBTL4Q8NA19 623 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 CAMKVQ8NCB2 501 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 OR4F6Q8NGB9 312 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 CCT6BQ92526 530 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 ZNF285Q96NJ3 590 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 MACROD1Q9BQ69 325 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 NDC1Q9BTX1 674 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 ZFP69BQ9UJL9 534 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 ZNF490Q9ULM2 529 aaPredicted RBP21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 STK38LQ9Y2H1 464 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 HEATR5BQ9P2D3 2071 aa21.12■□□□□ 0.97
CHMP2A-204ENST00000597848 HYKKA2RU49 373 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 ANKDD1BA6NHY2 528 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 STK17BO94768 372 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 DHRS4L1P0CG22 281 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 ZNF28P17035 718 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 HKDC1Q2TB90 917 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 FRMD7Q6ZUT3 714 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 GPRIN3Q6ZVF9 776 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 ANKRD53Q8N9V6 530 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 TTLQ8NG68 377 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 CLIP3Q96DZ5 547 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 CNDP1Q96KN2 507 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 ZNF382Q96SR6 550 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 ACTR5Q9H9F9 607 aaPredicted RBP21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 PCDHB3Q9Y5E6 796 aa21.11■□□□□ 0.97
CHMP2A-204ENST00000597848 ADAMTS20P59510 1910 aa21.1■□□□□ 0.97
CHMP2A-204ENST00000597848 H3BMH7 237 aa21.1■□□□□ 0.97
CHMP2A-204ENST00000597848 P2RX6O15547 441 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms