RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CDH1P12830 882 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 ACPPP15309 386 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 SAT1P21673 171 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 ITGA3P26006 1051 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 SSTR1P30872 391 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 BCL6P41182 706 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 HNMTP50135 292 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 PLTPP55058 493 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 C2orf54Q08AI8 447 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 PWP1Q13610 501 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 INPP5JQ15735 1006 aaPredicted RBP9.98□□□□□ -0.81
CCDC9-203ENST00000596938 PLEKHN1Q494U1 663 aaPredicted RBP9.98□□□□□ -0.81
CCDC9-203ENST00000596938 AGAP7PQ5VUJ5 663 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 IGFL2Q6UWQ7 119 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 NDUFAF7Q7L592 441 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 ASPGQ86U10 573 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 CEP97Q8IW35 865 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 ZADH2Q8N4Q0 377 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 Q8NA96 180 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 MFSD9Q8NBP5 474 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 GALNT11Q8NCW6 608 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 CPT1CQ8TCG5 803 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 SLC13A3Q8WWT9 602 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 ALKBH8Q96BT7 664 aaKnown RBP9.98□□□□□ -0.81
CCDC9-203ENST00000596938 PYCR2Q96C36 320 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 AGAP4Q96P64 663 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 CPNE1Q99829 537 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 YIPF2Q9BWQ6 316 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 MFRPQ9BY79 579 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 LHPPQ9H008 270 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 RAB17Q9H0T7 212 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 GPAMQ9HCL2 828 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 IKZF3Q9UKT9 509 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 MTO1Q9Y2Z2 717 aaKnown RBP9.98□□□□□ -0.81
CCDC9-203ENST00000596938 SLC22A7Q9Y694 548 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 PCSK5Q92824 1860 aa9.98□□□□□ -0.81
CCDC9-203ENST00000596938 LOC102723996A0A087X1L8 192 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 TRBC2A0A5B9 178 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CLEC18AA5D8T8 446 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CXorf49A8MYA2 514 aaPredicted RBP9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CDC7O00311 574 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 MAP2K7O14733 419 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 VPS4BO75351 444 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 WISP3O95389 354 aaPredicted RBP9.97□□□□□ -0.81
CCDC9-203ENST00000596938 BMP10O95393 424 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 C1QAP02745 245 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 HEXBP07686 556 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 SLC35G6P0C7Q6 338 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CXCR2P25025 360 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 SLC12A2P55011 1212 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 GPX6P59796 221 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 SNRPNP63162 240 aaKnown RBP9.97□□□□□ -0.81
CCDC9-203ENST00000596938 Q0VFX4 171 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CSHL1Q14406 222 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CRB2Q5IJ48 1285 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 IRAK1BP1Q5VVH5 260 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 TMEM205Q6UW68 189 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CLEC18BQ6UXF7 455 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 Q6ZS92 163 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 ADAMTSL2Q86TH1 951 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 ZC3H7AQ8IWR0 971 aaKnown RBP9.97□□□□□ -0.81
CCDC9-203ENST00000596938 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 PRSS58Q8IYP2 241 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 TBC1D19Q8N5T2 526 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 EFCAB3Q8N7B9 438 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CLEC18CQ8NCF0 446 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 OR9A4Q8NGU2 314 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 FBXO25Q8TCJ0 367 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 ANKRD49Q8WVL7 239 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 NEIL2Q969S2 332 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 TSPAN17Q96FV3 270 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 LMF1Q96S06 567 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 MACROD1Q9BQ69 325 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 DERL2Q9GZP9 239 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 ZBTB20Q9HC78 741 aaPredicted RBP9.97□□□□□ -0.81
CCDC9-203ENST00000596938 ZNF160Q9HCG1 818 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 TXNDC16Q9P2K2 825 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 CTNNAL1Q9UBT7 734 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 VPS4AQ9UN37 437 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 MRPS2Q9Y399 296 aaKnown RBP9.97□□□□□ -0.81
CCDC9-203ENST00000596938 OARD1Q9Y530 152 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 KCNE2Q9Y6J6 123 aa9.97□□□□□ -0.81
CCDC9-203ENST00000596938 IGHV1-45A0A0A0MS14 117 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 NSG1A0A0A6YYJ2 146 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 FFAR3O14843 346 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 GPR42O15529 346 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 OR1F1O43749 312 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 PIAS1O75925 651 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 COX6A1P12074 109 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 ICAM2P13598 275 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 IL10P22301 178 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 AHRP35869 848 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 GP5P40197 560 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 MAGEA4P43358 317 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 SCTRP47872 440 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 MAT1AQ00266 395 aaKnown RBP9.96□□□□□ -0.82
CCDC9-203ENST00000596938 GUCY2DQ02846 1103 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 UBAP2LQ14157 1087 aaKnown RBP9.96□□□□□ -0.82
CCDC9-203ENST00000596938 ZNF460Q14592 562 aa9.96□□□□□ -0.82
CCDC9-203ENST00000596938 USP10Q14694 798 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms