RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 METTL21AQ8WXB1 218 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 ZNF669Q96BR6 464 aaPredicted RBP13.97□□□□□ -0.17
PNKP-202ENST00000593706 CCDC120Q96HB5 630 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 TUBB6Q9BUF5 446 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 TGIF2Q9GZN2 237 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 RNF32Q9H0A6 362 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 ZNF700Q9H0M5 742 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 PLAC1Q9HBJ0 212 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 ABI3Q9P2A4 366 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 GALPQ9UBC7 116 aa13.97□□□□□ -0.17
PNKP-202ENST00000593706 IGKV1-8A0A0C4DH67 115 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 SMAPO00193 183 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 DNALI1O14645 258 aaPredicted RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 PRAMEF2O60811 474 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 PSIP1O75475 530 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 SYF2O95926 243 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 SNRPB2P08579 225 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 F7P08709 466 aaPredicted RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 C8orf89P0DMQ9 161 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 PAMP19021 973 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 HSD17B2P37059 387 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 AVPR1BP47901 424 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 CASP6P55212 293 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 SRSF11Q05519 484 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 PRDX1Q06830 199 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 DHX34Q14147 1143 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 ARHGAP19Q14CB8 494 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 NDUFA9Q16795 377 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 ZXDCQ2QGD7 858 aaPredicted RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 MINDY4Q4G0A6 757 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 MSS51Q4VC12 460 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 ACSBG2Q5FVE4 666 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 CASC4Q6P4E1 433 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 DENND6AQ8IWF6 608 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 ZNF808Q8N4W9 903 aaPredicted RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 PPFIBP2Q8ND30 876 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 DNAJB8Q8NHS0 232 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 GIMAP7Q8NHV1 300 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 NAPGQ99747 312 aaPredicted RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 WDR83Q9BRX9 315 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 SYNPO2LQ9H987 977 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 INTS10Q9NVR2 710 aaKnown RBP13.96□□□□□ -0.17
PNKP-202ENST00000593706 SAMD15Q9P1V8 674 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 MED13LQ71F56 2210 aa13.96□□□□□ -0.17
PNKP-202ENST00000593706 LOC102723996A0A087X1L8 192 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 P2RX6O15547 441 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 SEC24DO94855 1032 aaPredicted RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 SLC16A8O95907 504 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 COX6B1P14854 86 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 MST1P26927 711 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 HTR1EP28566 365 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 SLC1A2P43004 574 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 CA7P43166 264 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 CLCN7P51798 805 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 MAT1AQ00266 395 aaKnown RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 PMP22Q01453 160 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 PPP1R7Q15435 360 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.18
PNKP-202ENST00000593706 TTLL9Q3SXZ7 439 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 ZNF425Q6IV72 752 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 ZNF549Q6P9A3 640 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 TMEM205Q6UW68 189 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 RPTNQ6XPR3 784 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 BNC2Q6ZN30 1099 aaPredicted RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 CAPZA3Q96KX2 299 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 OR2A5Q96R48 311 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 PKP4Q99569 1192 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 EBNA1BP2Q99848 306 aaKnown RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 CHST11Q9NPF2 352 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 C19orf25Q9UFG5 118 aaPredicted RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 VPS9D1Q9Y2B5 631 aa13.95□□□□□ -0.18
PNKP-202ENST00000593706 SETD2Q9BYW2 2564 aaPredicted RBP13.95□□□□□ -0.18
PNKP-202ENST00000593706 HIVEP1P15822 2718 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 A8MUI8 341 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 HAT1O14929 419 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 FOXS1O43638 330 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 BANF1O75531 89 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 STATHP02808 62 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 PTGER4P35408 488 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 ABATP80404 500 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 CTBP1Q13363 440 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 FAM53BQ14153 422 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 CRYMQ14894 314 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 BTBD16Q32M84 506 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 ZNF766Q5HY98 468 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 SYDE1Q6ZW31 735 aaPredicted RBP13.94□□□□□ -0.18
PNKP-202ENST00000593706 PLD3Q8IV08 490 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 IGDCC3Q8IVU1 814 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 OR9A4Q8NGU2 314 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 ZNF480Q8WV37 535 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 MAGED4Q96JG8 741 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 SLC30A3Q99726 388 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 CCDC68Q9H2F9 335 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 STMN3Q9NZ72 180 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 ASIC3Q9UHC3 531 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 SAR1BQ9Y6B6 198 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 MAD1L1Q9Y6D9 718 aa13.94□□□□□ -0.18
PNKP-202ENST00000593706 IGHV3-20A0A0C4DH32 117 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms