RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TIAL1Q01085 375 aaKnown RBP eCLIP14.7□□□□□ -0.06
CIRBP-228ENST00000590347 KEAP1Q14145 624 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 KIAA0319Q5VV43 1072 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 ARMCX2Q7L311 632 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF551Q7Z340 670 aaPredicted RBP14.7□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF605Q86T29 641 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 KIF18BQ86Y91 864 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 CDC26Q8NHZ8 85 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 MYDGFQ969H8 173 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 SIGLEC11Q96RL6 698 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 MIXL1Q9H2W2 232 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 KLK14Q9P0G3 267 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 TRHDEQ9UKU6 1024 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 ARL5AQ9Y689 179 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 MYLKQ15746 1914 aa14.7□□□□□ -0.06
CIRBP-228ENST00000590347 MCM3APO60318 1980 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 AKAP8O43823 692 aaKnown RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 MAFO75444 373 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 MOCS2O96007 188 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 OPN1SWP03999 348 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 USP17L7P0C7H9 530 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 INSRRP14616 1297 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 ARSBP15848 533 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 FEN1P39748 380 aaKnown RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 MAP2K3P46734 347 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 PSPHP78330 225 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 LIPKQ5VXJ0 399 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF57Q68EA5 555 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 B3GLCTQ6Y288 498 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 ATPAF2Q8N5M1 289 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 OR52H1Q8NGJ2 320 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 IPCEF1Q8WWN9 437 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 WNT8BQ93098 351 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF599Q96NL3 588 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 BRINP2Q9C0B6 783 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 PRMT7Q9NVM4 692 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 DUSP12Q9UNI6 340 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 SLC9A8Q9Y2E8 581 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 CMAHPQ9Y471 501 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 WDR81Q562E7 1941 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 ZNF487B1APH4 448 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 RHOBTB1O94844 696 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 CD86P42081 329 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 GPR85P60893 370 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 CXCR4P61073 352 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 KIAA0930Q6ICG6 404 aaPredicted RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 CCDC149Q6ZUS6 474 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 SNX20Q7Z614 316 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 C19orf18Q8NEA5 215 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 BEST4Q8NFU0 473 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 SETD6Q8TBK2 473 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 GTPBP3Q969Y2 492 aaKnown RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 FEVQ99581 238 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 ULBP1Q9BZM6 244 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 NT5MQ9NPB1 228 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 MRPL39Q9NYK5 338 aaKnown RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 MPP6Q9NZW5 540 aa14.69□□□□□ -0.06
CIRBP-228ENST00000590347 PPIEQ9UNP9 301 aaKnown RBP14.69□□□□□ -0.06
CIRBP-228ENST00000590347 IGKV6D-21A0A0A0MT36 114 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 TCRBV16S1A1N1A0A5B0 115 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GUCA1CO95843 209 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 NNMTP40261 264 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 BCL2L15Q5TBC7 163 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 TRIQKQ629K1 86 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 DOK6Q6PKX4 331 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GPRIN3Q6ZVF9 776 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 SLC9A6Q92581 669 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 SMAD5Q99717 465 aaKnown RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 POLMQ9NP87 494 aaPredicted RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 C1orf109Q9NX04 203 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 IMPAD1Q9NX62 359 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 PRAMEF33A0A0G2JMD5 474 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 HAS3O00219 553 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 PRAMEF10O60809 474 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GLAP06280 429 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 ACADMP11310 421 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GDF5P43026 501 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 CPT1AP50416 773 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 ETV1P50549 477 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 RAB8AP61006 207 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 RRAS2P62070 204 aaPredicted RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 BNC1Q01954 994 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 CRYZQ08257 329 aaKnown RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 C22orf42Q6IC83 251 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GPR65Q8IYL9 337 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 LIX1Q8N485 282 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 PAF1Q8N7H5 531 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 OR10Z1Q8NGY1 313 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 MED10Q9BTT4 135 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 SPNS1Q9H2V7 528 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 REEP1Q9H902 201 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 DIABLOQ9NR28 239 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 ZIM2Q9NZV7 527 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 ENOPH1Q9UHY7 261 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 AAR2Q9Y312 384 aaKnown RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 CXCL11O14625 94 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 OR1E2P47887 323 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 SRP54P61011 504 aaKnown RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 BHLHB9Q6PI77 547 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GPR149Q86SP6 731 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms