RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CCNT2O60583 730 aaKnown RBP19.26■□□□□ 0.67
DDX39A-207ENST00000588542 RAB40ALP0C0E4 278 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 C1GALT1C1LP0DN25 315 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 PYGBP11216 843 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 ALAS2P22557 587 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 VARSP26640 1264 aaKnown RBP19.26■□□□□ 0.67
DDX39A-207ENST00000588542 GRK3P35626 688 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 DCDP81605 110 aaKnown RBP19.26■□□□□ 0.67
DDX39A-207ENST00000588542 SETDB1Q15047 1291 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 PFKFB4Q16877 469 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 SH2D5Q6ZV89 423 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 LRRC70Q7Z2Q7 622 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 MFSD9Q8NBP5 474 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 ACMSDQ8TDX5 336 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 SCYL1Q96KG9 808 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 GPR87Q9BY21 358 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 XPR1Q9UBH6 696 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 KCND3Q9UK17 655 aa19.26■□□□□ 0.67
DDX39A-207ENST00000588542 FARSAQ9Y285 508 aaKnown RBP19.26■□□□□ 0.67
DDX39A-207ENST00000588542 LRRC14BA6NHZ5 514 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 TK2O00142 265 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 OR1F1O43749 312 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 CDH16O75309 829 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 KATNA1O75449 491 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 ONECUT2O95948 504 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 TUBBP07437 444 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 GFAPP14136 432 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 AGXTP21549 392 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 PTPN4P29074 926 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 SCTRP47872 440 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 ALDH18A1P54886 795 aaKnown RBP19.25■□□□□ 0.67
DDX39A-207ENST00000588542 RPS18P62269 152 aaKnown RBP19.25■□□□□ 0.67
DDX39A-207ENST00000588542 NFKB2Q00653 900 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 PDK4Q16654 411 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 NKAIN1Q4KMZ8 207 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 ATG9BQ674R7 924 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 SNX31Q8N9S9 440 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 ANKRD53Q8N9V6 530 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.25■□□□□ 0.67
DDX39A-207ENST00000588542 STARD8Q92502 1023 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 MACROD1Q9BQ69 325 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 MRPL57Q9BQC6 102 aaKnown RBP19.25■□□□□ 0.67
DDX39A-207ENST00000588542 CAPS2Q9BXY5 557 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 NLNQ9BYT8 704 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 ACTL8Q9H568 366 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 TMEM216Q9P0N5 145 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 CPSF2Q9P2I0 782 aaKnown RBP19.25■□□□□ 0.67
DDX39A-207ENST00000588542 NDOR1Q9UHB4 597 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 CHD6Q8TD26 2715 aa19.25■□□□□ 0.67
DDX39A-207ENST00000588542 K7EPI3 171 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 TXNDC9O14530 226 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 NKX2-8O15522 239 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 CNOT3O75175 753 aaKnown RBP19.24■□□□□ 0.67
DDX39A-207ENST00000588542 CYP4F2P78329 520 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 SLC9A5Q14940 896 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 NCF4Q15080 339 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 MUM1Q2TAK8 710 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 GARNL3Q5VVW2 1013 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 COX15Q7KZN9 410 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 GPR155Q7Z3F1 870 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 ASPGQ86U10 573 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 LCA5Q86VQ0 697 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 METTL27Q8N6F8 245 aaPredicted RBP19.24■□□□□ 0.67
DDX39A-207ENST00000588542 ENDOVQ8N8Q3 282 aaKnown RBP19.24■□□□□ 0.67
DDX39A-207ENST00000588542 ZSCAN1Q8NBB4 408 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 MOCOSQ96EN8 888 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 WDR34Q96EX3 536 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 AIF1LQ9BQI0 150 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 FAM117AQ9C073 453 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 MRPL46Q9H2W6 279 aaKnown RBP19.24■□□□□ 0.67
DDX39A-207ENST00000588542 EHD1Q9H4M9 534 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 GEMIN8Q9NWZ8 242 aaKnown RBP19.24■□□□□ 0.67
DDX39A-207ENST00000588542 OPTCQ9UBM4 332 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 MRPS2Q9Y399 296 aaKnown RBP19.24■□□□□ 0.67
DDX39A-207ENST00000588542 IGSF10Q6WRI0 2623 aa19.24■□□□□ 0.67
DDX39A-207ENST00000588542 ZFYVE26Q68DK2 2539 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 ZNF891A8MT65 544 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 CLGNO14967 610 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 FOXS1O43638 330 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 CREG1O75629 220 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 SIX3O95343 332 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 CD22P20273 847 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 OR1D4P47884 311 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 RPS15P62841 145 aaKnown RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 E2F2Q14209 437 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 PCBP2Q15366 365 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■■■■ 27.4
DDX39A-207ENST00000588542 FAM69BQ5VUD6 431 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 MRPL14Q6P1L8 145 aaKnown RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 C16orf46Q6P387 395 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 PTGR2Q8N8N7 351 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 CAMKVQ8NCB2 501 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 SLC13A3Q8WWT9 602 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 RRAGDQ9NQL2 400 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 IFT80Q9P2H3 777 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-207ENST00000588542 COPG2Q9UBF2 871 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 ZFP69BQ9UJL9 534 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 LHX6Q9UPM6 363 aa19.23■□□□□ 0.67
DDX39A-207ENST00000588542 TLDC2A0PJX2 215 aa19.22■□□□□ 0.67
DDX39A-207ENST00000588542 C9J4A7 227 aa19.22■□□□□ 0.67
DDX39A-207ENST00000588542 GSTA1P08263 222 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms