RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 ANKMY1Q9P2S6 941 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 SLC22A14Q9Y267 594 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 TDRKHQ9Y2W6 561 aaKnown RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 PCDHGA1Q9Y5H4 931 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 ANKRD11Q6UB99 2663 aaPredicted RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
VMP1-202ENST00000585847 DSPP15924 2871 aaKnown RBP12.16□□□□□ -0.46
VMP1-202ENST00000585847 A0A1W2PPV9 198 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 CFAP73A6NFT4 308 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ERICH4A6NGS2 130 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 PIP5K1BO14986 540 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 UBDO15205 165 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 PRR35P0CG20 571 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 TYRP1P17643 537 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ALDH4A1P30038 563 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 PIK3CBP42338 1070 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 PDX1P52945 283 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 PPP1CAP62136 330 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ERVK-8P63133 956 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 INSM1Q01101 510 aaPredicted RBP12.15□□□□□ -0.46
VMP1-202ENST00000585847 DMTNQ08495 405 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ILKQ13418 452 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 FASTKQ14296 549 aaKnown RBP12.15□□□□□ -0.46
VMP1-202ENST00000585847 KIR2DS3Q14952 304 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 LSM12Q3MHD2 195 aaKnown RBP12.15□□□□□ -0.46
VMP1-202ENST00000585847 CDCP2Q5VXM1 449 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 LETMD1Q6P1Q0 360 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 LARP4Q71RC2 724 aaKnown RBP eCLIP12.15□□□□□ -0.46
VMP1-202ENST00000585847 C17orf64Q86WR6 236 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 CDYL2Q8N8U2 506 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ABHD11Q8NFV4 315 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 OR4E2Q8NGC2 313 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 AGR3Q8TD06 166 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 STARD8Q92502 1023 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 MED8Q96G25 268 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 EBF4Q9BQW3 602 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 NUDT22Q9BRQ3 303 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.15□□□□□ -0.46
VMP1-202ENST00000585847 NMUR2Q9GZQ4 415 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 TMEM9Q9P0T7 183 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ATXN7L1Q9ULK2 861 aaPredicted RBP12.15□□□□□ -0.46
VMP1-202ENST00000585847 PCDHB11Q9Y5F2 797 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 WDFY3Q8IZQ1 3526 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 ADAMTS20P59510 1910 aa12.15□□□□□ -0.46
VMP1-202ENST00000585847 LRRC14BA6NHZ5 514 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 BBIP1A8MTZ0 92 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 FOXE1O00358 373 aaPredicted RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 MANBAO00462 879 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 UBXN7O94888 489 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 OR4F21O95013 312 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 RPLP0P05388 317 aaKnown RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 THRAP10827 490 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 DDX5P17844 614 aaKnown RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 EPHA3P29320 983 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 GSTM5P46439 218 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ARFIP1P53367 373 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 GPLD1P80108 840 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 RELAQ04206 551 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 EMX2Q04743 252 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 CHIT1Q13231 466 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 IMPG1Q17R60 797 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 GLIPR1L2Q4G1C9 344 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 SLC9B1Q4ZJI4 515 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 XKR6Q5GH73 641 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 COQ5Q5HYK3 327 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 THEMIS2Q5TEJ8 643 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 NXNQ6DKJ4 435 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 CLEC6AQ6EIG7 209 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 MED27Q6P2C8 311 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 DHRS13Q6UX07 377 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ATG14Q6ZNE5 492 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 SLCO4C1Q6ZQN7 724 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 USP53Q70EK8 1073 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 AMIGO1Q86WK6 493 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ARHGAP24Q8N264 748 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 RP9Q8TA86 221 aaKnown RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 TUBGCP3Q96CW5 907 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 PPM1MQ96MI6 270 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ATG10Q9H0Y0 220 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ABCG4Q9H172 646 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 MMADHCQ9H3L0 296 aaPredicted RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 EPB41L1Q9H4G0 881 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ZNF385DQ9H6B1 395 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 EVA1BQ9NVM1 165 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 SPHK1Q9NYA1 384 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 NOP53Q9NZM5 478 aaKnown RBP12.14□□□□□ -0.47
VMP1-202ENST00000585847 TAGLN3Q9UI15 199 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ZNF225Q9UK10 706 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 HEATR5BQ9P2D3 2071 aa12.14□□□□□ -0.47
VMP1-202ENST00000585847 NBEAQ8NFP9 2946 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 OR6C74A6NCV1 312 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 OR5K3A6NET4 321 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 CAPN14A8MX76 684 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 TMEM233B4DJY2 109 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 E9PBE3 544 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms