RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 MRPS2Q9Y399 296 aaKnown RBP19.41■□□□□ 0.7
SS18-224ENST00000584083 DYRK1BQ9Y463 629 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 OARD1Q9Y530 152 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 DOCK10Q96BY6 2186 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 PHGDHO43175 533 aaKnown RBP19.4■□□□□ 0.7
SS18-224ENST00000584083 LCMT2O60294 686 aaKnown RBP19.4■□□□□ 0.7
SS18-224ENST00000584083 STMN1P16949 149 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 STX2P32856 288 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 SLC26A3P40879 764 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 CSRP3P50461 194 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 MEF2AQ02078 507 aaPredicted RBP19.4■□□□□ 0.7
SS18-224ENST00000584083 GUCY2DQ02846 1103 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 AIMP2Q13155 320 aaKnown RBP19.4■□□□□ 0.7
SS18-224ENST00000584083 MYBPC3Q14896 1274 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 NADK2Q4G0N4 442 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 VWA5B1Q5TIE3 1220 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 ASPGQ86U10 573 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 LAPTM4BQ86VI4 370 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 TBC1D19Q8N5T2 526 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 AMER3Q8N944 861 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 MFSD9Q8NBP5 474 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 ABHD11Q8NFV4 315 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 OR9A4Q8NGU2 314 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 FBF1Q8TES7 1133 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 TSNARE1Q96NA8 513 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 GPR22Q99680 433 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 UNKQ9C0B0 810 aaKnown RBP19.4■□□□□ 0.7
SS18-224ENST00000584083 DERL2Q9GZP9 239 aa19.4■□□□□ 0.7
SS18-224ENST00000584083 MKKSQ9NPJ1 570 aaPredicted RBP19.4■□□□□ 0.7
SS18-224ENST00000584083 IGLV3-12A0A075B6K2 115 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 OR1F1O43749 312 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 KLHL41O60662 606 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 DPM1O60762 260 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 ALOX12BO75342 701 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 ALPPP05187 535 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 CCDC166P0CW27 439 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 ITGA3P26006 1051 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 SPRP35270 261 aaPredicted RBP19.39■□□□□ 0.69
SS18-224ENST00000584083 EMP2P54851 167 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 CDKL1Q00532 357 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 SYT16Q17RD7 645 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 TUBB8Q3ZCM7 444 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 CATSPEREQ5SY80 951 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 GRTP1Q5TC63 336 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 THOC6Q86W42 341 aaKnown RBP19.39■□□□□ 0.69
SS18-224ENST00000584083 SPATA6LQ8N4H0 392 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 MNS1Q8NEH6 495 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 OR4K1Q8NGD4 311 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 ZCCHC10Q8TBK6 192 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 SLC13A3Q8WWT9 602 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 SLC5A11Q8WWX8 675 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 NEIL2Q969S2 332 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 TM4SF19Q96DZ7 209 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 SMAD5Q99717 465 aaKnown RBP19.39■□□□□ 0.69
SS18-224ENST00000584083 FAM129AQ9BZQ8 928 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 CLMPQ9H6B4 373 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 C14orf105Q9NVL8 296 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 SLC22A14Q9Y267 594 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 MAP4K5Q9Y4K4 846 aa19.39■□□□□ 0.69
SS18-224ENST00000584083 TENM4Q6N022 2769 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 TRBC2A0A5B9 178 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 MAP2K7O14733 419 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 FAM155BO75949 473 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 C1QAP02745 245 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 HEXBP07686 556 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 SLC35G6P0C7Q6 338 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 ACPPP15309 386 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 HNMTP50135 292 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 MAT1AQ00266 395 aaKnown RBP19.38■□□□□ 0.69
SS18-224ENST00000584083 IRAK1BP1Q5VVH5 260 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 TMEM214Q6NUQ4 689 aaKnown RBP19.38■□□□□ 0.69
SS18-224ENST00000584083 HPS6Q86YV9 775 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 KCT2Q8NC54 265 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 OR11G2Q8NGC1 345 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 MFRPQ9BY79 579 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 ANKHQ9HCJ1 492 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 ZDHHC18Q9NUE0 388 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 C5AR2Q9P296 337 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 KCNE2Q9Y6J6 123 aa19.38■□□□□ 0.69
SS18-224ENST00000584083 NCF1BA6NI72 391 aaPredicted RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 TTLL8A6PVC2 850 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 NCF1CA8MVU1 366 aaPredicted RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 IDSB3KWA1 339 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 H0YIG0 161 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 IPO13O94829 963 aaKnown RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 WISP3O95389 354 aaPredicted RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 NSA2O95478 260 aaKnown RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 SERPIND1P05546 499 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 NCF1P14598 390 aaPredicted RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 IL1RNP18510 177 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 CXCR2P25025 360 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 MLLT10P55197 1068 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 SOX8P57073 446 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 RAB10P61026 200 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 SNRPNP63162 240 aaKnown RBP19.37■□□□□ 0.69
SS18-224ENST00000584083 SLMAPQ14BN4 828 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 IGFBP7Q16270 282 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 FAAH2Q6GMR7 532 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 PRSS41Q7RTY9 318 aa19.37■□□□□ 0.69
SS18-224ENST00000584083 TMPRSS11BQ86T26 416 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms