RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 CTBP1Q13363 440 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GKAP1Q5VSY0 366 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CUZD1Q86UP6 607 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CCDC197Q8NCU1 140 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ST6GALNAC3Q8NDV1 305 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ARMC2Q8NEN0 867 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CALML6Q8TD86 181 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 LRRC8CQ8TDW0 803 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PPP4R1Q8TF05 950 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 FKBP10Q96AY3 582 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 VPS39Q96JC1 886 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 BARD1Q99728 777 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 FAM167BQ9BTA0 163 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 MANSC1Q9H8J5 431 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ZBTB20Q9HC78 741 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC6A20Q9NP91 592 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 FBXL4Q9UKA2 621 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PLAGL1Q9UM63 463 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NTNG1Q9Y2I2 539 aa9.3□□□□□ -0.92
CDK5RAP3-227ENST00000583352 RP1L1Q8IWN7 2480 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 HIVEP3Q5T1R4 2406 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 A0A096LPK6 155 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 A0A1B0GX78 115 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CCDC162PA2VCL2 907 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GLRA3O75311 464 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ALBP02768 609 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PROCP04070 461 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 MAGP20916 626 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 BGNP21810 368 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PEBP1P30086 187 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PKLRP30613 574 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GMPRP36959 345 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC1A2P43004 574 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TSFMP43897 325 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 RAB28P51157 221 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PER3P56645 1201 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ZKSCAN8Q15776 578 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 AGAP7PQ5VUJ5 663 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 YOD1Q5VVQ6 348 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PRAMEF13Q5VWM6 474 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CES4AQ5XG92 561 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CNSTQ6PJW8 725 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NAPRTQ6XQN6 538 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TTLL10Q6ZVT0 673 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CMC1Q7Z7K0 106 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CILP2Q8IUL8 1156 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NUDCD3Q8IVD9 361 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 MCATQ8IVS2 390 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 LMNTD2Q8IXW0 634 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PLD6Q8N2A8 252 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TMEM151AQ8N4L1 468 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 DNAJB14Q8TBM8 379 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC22A18Q96BI1 424 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 VPS50Q96JG6 964 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CABS1Q96KC9 395 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 AGAP4Q96P64 663 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TTC1Q99614 292 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NSRP1Q9H0G5 558 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 WDR54Q9H977 334 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CAB39LQ9H9S4 337 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLCO1B3Q9NPD5 702 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC22A11Q9NSA0 550 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 INTS7Q9NVH2 962 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TMEM216Q9P0N5 145 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 MARCH4Q9P2E8 410 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC39A10Q9ULF5 831 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NUP210LQ5VU65 1888 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 PCM1Q15154 2024 aa9.29□□□□□ -0.92
CDK5RAP3-227ENST00000583352 RELNP78509 3460 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 OR51F1A6NGY5 319 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CCT8L1PA6NM43 557 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SOCS6O14544 535 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 DSCR3O14972 297 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ALOX12BO75342 701 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GOT2P00505 430 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 RPN2P04844 631 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 COL6A2P12110 1019 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CRABP2P29373 138 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ALDH3A1P30838 453 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GCGRP47871 477 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TAS2R39P59534 338 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TIAL1Q01085 375 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 POU4F1Q01851 419 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ILF2Q12905 390 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 IFT88Q13099 833 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 USP10Q14694 798 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GRM7Q14831 915 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 RBBP7Q16576 425 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NKG7Q16617 165 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GLIPR1L2Q4G1C9 344 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ZC3H12BQ5HYM0 836 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 B3GNTL1Q67FW5 361 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 OTOAQ7RTW8 1153 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 OVCH1Q7RTY7 1134 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SPATA21Q7Z572 469 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TICAM1Q8IUC6 712 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TMEM151BQ8IW70 566 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TRIM42Q8IWZ5 723 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms