RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 MMAAQ8IVH4 418 aaKnown RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 WDR20Q8TBZ3 569 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 MAGEB10Q96LZ2 347 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 DPH2Q9BQC3 489 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 DCAF13Q9NV06 445 aaKnown RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 SH3BP4Q9P0V3 963 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 RUVBL1Q9Y265 456 aaKnown RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 MAN2B2Q9Y2E5 1009 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 AP3M1Q9Y2T2 418 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 ANXA4P09525 319 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 GSTT2BP0CG30 244 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 LAMP1P11279 417 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 MLLT10P55197 1068 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 RPS13P62277 151 aaKnown RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 TBPL1P62380 186 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 ABHD18Q0P651 414 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 CATSPEREQ5SY80 951 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 GRHL2Q6ISB3 625 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 GPR149Q86SP6 731 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 C7orf61Q8IZ16 206 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 HUS1BQ8NHY5 278 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 ZCCHC2Q9C0B9 1178 aaKnown RBP13.2□□□□□ -0.3
SRSF1-205ENST00000582730 TOR3AQ9H497 397 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 TMEM9Q9P0T7 183 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 ITGB1BP2Q9UKP3 347 aa13.2□□□□□ -0.3
SRSF1-205ENST00000582730 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 MGAT4DA6NG13 374 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 B4GAT1O43505 415 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 BCL10O95999 233 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 NTRK1P04629 796 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ALPLP05186 524 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 PRPH2P23942 346 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 HNF4AP41235 474 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF362Q5T0B9 420 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 GET4Q7L5D6 327 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 EID3Q8N140 333 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 OR7G3Q8NG95 312 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 DNAJB8Q8NHS0 232 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF480Q8WV37 535 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 REXO5Q96IC2 774 aaKnown RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF639Q9UID6 485 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 FBXO10Q9UK96 956 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 MYO1GB0I1T2 1018 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 UGDHO60701 494 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 TRIM16LQ309B1 348 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 FAM78AQ5JUQ0 283 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 IGFN1Q86VF2 1251 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 AASDHPPTQ9NRN7 309 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 NFKBIL1Q9UBC1 381 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 DYRK1BQ9Y463 629 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 C1orf105O95561 183 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 NFATC1O95644 943 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ADRB3P13945 408 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 PTPN6P29350 595 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 NRIP1P48552 1158 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 SRSF11Q05519 484 aaKnown RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 NFE2L1Q14494 772 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 CAPN13Q6MZZ7 669 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF551Q7Z340 670 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 NRSN1Q8IZ57 195 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 TAMM41Q96BW9 452 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 COQ10AQ96MF6 247 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 IFT80Q9P2H3 777 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-205ENST00000582730 BTBD3Q9Y2F9 522 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 TMEM98Q9Y2Y6 226 aa13.19□□□□□ -0.3
SRSF1-205ENST00000582730 KRBA1A5PL33 1030 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 HEPACAM2A8MVW5 462 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 HOXC11O43248 304 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SPINT1O43278 529 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 DIRAS1O95057 198 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 FKBP9O95302 570 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 CA3P07451 260 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 RETP07949 1114 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SHMT2P34897 504 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 CASP9P55211 416 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 UBE3AQ05086 875 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ELP6Q0PNE2 266 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SLBPQ14493 270 aaKnown RBP eCLIP13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF234Q14588 700 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 HNRNPA1L2Q32P51 320 aaKnown RBP13.18□□□□□ -0.3
SRSF1-205ENST00000582730 C9orf64Q5T6V5 341 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 MED27Q6P2C8 311 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 FKBP9P1Q75LS8 142 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 RTL10Q7L3V2 364 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 CALHM3Q86XJ0 350 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF555Q8NEP9 628 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 PYURFQ96I23 114 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SAMD11Q96NU1 681 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ACAT2Q9BWD1 397 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SPATA6Q9NWH7 488 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms