RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SCN2AQ99250 2005 aa10.02□□□□□ -0.8
RFFL-209ENST00000581265 ZCWPW2A0A1B0GU75 182 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CTAGE9A4FU28 777 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 HAT1O14929 419 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 NSA2O95478 260 aaKnown RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 NADKO95544 446 aaPredicted RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 SYF2O95926 243 aaKnown RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 UQCRHP07919 91 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 IMPA1P29218 277 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 BCL6P41182 706 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CA7P43166 264 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 ZNF33BQ06732 778 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 GPS1Q13098 491 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CTBP1Q13363 440 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 THOC5Q13769 683 aaKnown RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 PTK6Q13882 451 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 DHX34Q14147 1143 aaKnown RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 TRIP13Q15645 432 aaPredicted RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 LONRF1Q17RB8 773 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 PLAG1Q6DJT9 500 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 ZNF470Q6ECI4 717 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CASC4Q6P4E1 433 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 VN1R4Q7Z5H5 301 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CPEB2Q7Z5Q1 589 aaKnown RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 ADCK2Q7Z695 626 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 PLD3Q8IV08 490 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 DENND6AQ8IWF6 608 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 LMNTD2Q8IXW0 634 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 MCUQ8NE86 351 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 OR9A4Q8NGU2 314 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 OR51Q1Q8NH59 317 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 TM4SF19Q96DZ7 209 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 THAP11Q96EK4 314 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CCDC120Q96HB5 630 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 ZNF354BQ96LW1 612 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CCDC68Q9H2F9 335 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 SAMD15Q9P1V8 674 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 SUCOQ9UBS9 1254 aaKnown RBP10.02□□□□□ -0.81
RFFL-209ENST00000581265 COMMD10Q9Y6G5 202 aa10.02□□□□□ -0.81
RFFL-209ENST00000581265 CSMD1Q96PZ7 3565 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 TRGV8A0A0C4DH27 118 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 IGHV3-20A0A0C4DH32 117 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 A8MUI8 341 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 EIF3FO00303 357 aaPredicted RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 CCL21O00585 134 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 KIF5CO60282 957 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 CEP104O60308 925 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 XCR1P46094 333 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 AGTR2P50052 363 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 RPS15AP62244 130 aaKnown RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 CUL1Q13616 776 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 KCTD19Q17RG1 926 aaPredicted RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 ZNF630Q2M218 657 aaPredicted RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 ACER2Q5QJU3 275 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 ANKRD22Q5VYY1 191 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 TMEM214Q6NUQ4 689 aaKnown RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 RPTNQ6XPR3 784 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 MRGPRGQ86SM5 289 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 SPNS2Q8IVW8 549 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 ZNF808Q8N4W9 903 aaPredicted RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 CD200R1Q8TD46 325 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 MCOLN3Q8TDD5 553 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 GPR21Q99679 349 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 FAM129AQ9BZQ8 928 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 PCBD2Q9H0N5 130 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 XAB2Q9HCS7 855 aaKnown RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 CHST11Q9NPF2 352 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 CCDC177Q9NQR7 707 aaPredicted RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 ABCF3Q9NUQ8 709 aa10.01□□□□□ -0.81
RFFL-209ENST00000581265 C19orf25Q9UFG5 118 aaPredicted RBP10.01□□□□□ -0.81
RFFL-209ENST00000581265 CPAMD8Q8IZJ3 1885 aa10□□□□□ -0.81
RFFL-209ENST00000581265 WISP2O76076 250 aa10□□□□□ -0.81
RFFL-209ENST00000581265 SEC24DO94855 1032 aaPredicted RBP10□□□□□ -0.81
RFFL-209ENST00000581265 HAUS5O94927 633 aa10□□□□□ -0.81
RFFL-209ENST00000581265 KRT14P02533 472 aa10□□□□□ -0.81
RFFL-209ENST00000581265 IL10P22301 178 aa10□□□□□ -0.81
RFFL-209ENST00000581265 CXCR5P32302 372 aa10□□□□□ -0.81
RFFL-209ENST00000581265 MAGEA3P43357 314 aa10□□□□□ -0.81
RFFL-209ENST00000581265 VPS41P49754 854 aa10□□□□□ -0.81
RFFL-209ENST00000581265 TERF1P54274 439 aa10□□□□□ -0.81
RFFL-209ENST00000581265 CSNK1G2P78368 415 aa10□□□□□ -0.81
RFFL-209ENST00000581265 SRSF11Q05519 484 aaKnown RBP10□□□□□ -0.81
RFFL-209ENST00000581265 RBPJQ06330 500 aa10□□□□□ -0.81
RFFL-209ENST00000581265 BTBD16Q32M84 506 aa10□□□□□ -0.81
RFFL-209ENST00000581265 MINDY4Q4G0A6 757 aa10□□□□□ -0.81
RFFL-209ENST00000581265 KRTCAP3Q53RY4 240 aa10□□□□□ -0.81
RFFL-209ENST00000581265 ZNF766Q5HY98 468 aa10□□□□□ -0.81
RFFL-209ENST00000581265 XKRXQ6PP77 449 aa10□□□□□ -0.81
RFFL-209ENST00000581265 SPNS3Q6ZMD2 512 aa10□□□□□ -0.81
RFFL-209ENST00000581265 BNC2Q6ZN30 1099 aaPredicted RBP10□□□□□ -0.81
RFFL-209ENST00000581265 LANCL3Q6ZV70 420 aa10□□□□□ -0.81
RFFL-209ENST00000581265 UBE2R2Q712K3 238 aaPredicted RBP10□□□□□ -0.81
RFFL-209ENST00000581265 PRSS41Q7RTY9 318 aa10□□□□□ -0.81
RFFL-209ENST00000581265 ANKRD37Q7Z713 158 aa10□□□□□ -0.81
RFFL-209ENST00000581265 SHISA5Q8N114 240 aa10□□□□□ -0.81
RFFL-209ENST00000581265 CAMKVQ8NCB2 501 aa10□□□□□ -0.81
RFFL-209ENST00000581265 MDS2Q8NDY4 140 aa10□□□□□ -0.81
RFFL-209ENST00000581265 PLPP5Q8NEB5 264 aa10□□□□□ -0.81
RFFL-209ENST00000581265 TRIM58Q8NG06 486 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms