RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ALKBH2Q6NS38 261 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 HAGHLQ6PII5 290 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 C1orf52Q8N6N3 182 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 OR52E4Q8NGH9 312 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 SLC7A6OSQ96CW6 309 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 SLC2A6Q9UGQ3 507 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 HCN2Q9UL51 889 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 PCDHGB2Q9Y5G2 931 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 C3P01024 1663 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 KLRG2A4D1S0 409 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 G6PDP11413 515 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 MAPK3P27361 379 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 ABHD18Q0P651 414 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 FAM189A2Q15884 450 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 RELL1Q8IUW5 271 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 ASCC1Q8N9N2 400 aaKnown RBP14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 DENND6BQ8NEG7 585 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 PHOX2BQ99453 314 aa14.14□□□□□ -0.15
CSNK1D-217ENST00000581241 IRAK2O43187 625 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 ST3GAL3Q11203 375 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 TOR1AIP1Q5JTV8 583 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 CLEC20AQ6ZU45 233 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 PMEPA1Q969W9 287 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 BTBD1Q9H0C5 482 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 ZDHHC4Q9NPG8 344 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 MGAT4BQ9UQ53 548 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 RPP14O95059 124 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 MAGEA8P43361 318 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 CDH11P55287 796 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 RPS3AP61247 264 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 VMACQ2NL98 169 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 PRAMEF14Q5SWL7 426 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 PRAMEF13Q5VWM6 474 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 MARVELD2Q8N4S9 558 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 TMEM145Q8NBT3 493 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 COQ8AQ8NI60 647 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 KCTD13Q8WZ19 329 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 POLE4Q9NR33 117 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 ZCCHC3Q9NUD5 404 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 TLX2O43763 284 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 PENKP01210 267 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 PRKACGP22612 351 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 GPR68Q15743 365 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 ZNF630Q2M218 657 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 VARS2Q5ST30 1063 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 CMTR2Q8IYT2 770 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 JSRP1Q96MG2 331 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 TSSK6Q9BXA6 273 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 OR51I1Q9H343 314 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 EMC3Q9P0I2 261 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 CXCR1P25024 350 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 CLCN2P51788 898 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 PAFAH1B3Q15102 231 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 CYBRD1Q53TN4 286 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 SLC15A3Q8IY34 581 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 C2CD4AQ8NCU7 369 aaPredicted RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 FCAMRQ8WWV6 532 aa14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 TRMT61BQ9BVS5 477 aaKnown RBP14.13□□□□□ -0.15
CSNK1D-217ENST00000581241 C13orf42A0A1B0GVH6 325 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 DLDP09622 509 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 C7P10643 843 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 CTC1Q2NKJ3 1217 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 MINDY4Q4G0A6 757 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 OR2L8Q8NGY9 312 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 TTYH2Q9BSA4 534 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 XKR8Q9H6D3 395 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 ABCD2Q9UBJ2 740 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 PCDHGB5Q9Y5G0 923 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 CPQQ9Y646 472 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 TTC24A2A3L6 582 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 TLL1O43897 1013 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 PIGRP01833 764 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 EBLN1P0CF75 366 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 FGF3P11487 239 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 ARSFP54793 590 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 ERVK-21P61565 698 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 ZNF267Q14586 743 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 MAD2L1BPQ15013 274 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 HSD17B12Q53GQ0 312 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 DNM1P34Q6PK57 102 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 AMZ2Q86W34 360 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 DRAXINQ8NBI3 349 aaPredicted RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 SGCDQ92629 289 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 OSTF1Q92882 214 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 CCDC120Q96HB5 630 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 CDKN2AIPNLQ96HQ2 116 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 NTPCRQ9BSD7 190 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 POPDC3Q9HBV1 291 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 TRAV6A0A075B6T7 132 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 HOXC12P31275 282 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 TRAM1Q15629 374 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 GXYLT1Q4G148 440 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 SYPL2Q5VXT5 272 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 HMBOX1Q6NT76 420 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 RBM23Q86U06 439 aaKnown RBP14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 PLEKHO2Q8TD55 490 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 SLC25A36Q96CQ1 311 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 RNF121Q9H920 327 aa14.12□□□□□ -0.15
CSNK1D-217ENST00000581241 UTS2RQ9UKP6 389 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms