RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 KATNA1O75449 491 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 IPO13O94829 963 aaKnown RBP20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 B3GALT4O96024 378 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 COL6A2P12110 1019 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 OR1D4P47884 311 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 RPS15AP62244 130 aaKnown RBP20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 PDK4Q16654 411 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 CDKL4Q5MAI5 379 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 BROXQ5VW32 411 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 COX15Q7KZN9 410 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 TEX9Q8N6V9 391 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 MFSD9Q8NBP5 474 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 RERGQ96A58 199 aaPredicted RBP20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 CABS1Q96KC9 395 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 LRFN5Q96NI6 719 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 NSUN5Q96P11 429 aaKnown RBP20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 CNOT10Q9H9A5 744 aaKnown RBP20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 AP1M2Q9Y6Q5 423 aa20.69■□□□□ 0.9
CDC42EP4-203ENST00000578516 TRBC2A0A5B9 178 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 A8MT66 165 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 DSCR3O14972 297 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 SRPX2O60687 465 aaPredicted RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 CDH16O75309 829 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 SERPIND1P05546 499 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 CCNYL3P0C7X3 344 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 C1GALT1C1LP0DN25 315 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 PRKAR1AP10644 381 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 EEF1DP29692 281 aaKnown RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 TMPRSS3P57727 454 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 ZNF844Q08AG5 666 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 RBBP5Q15291 538 aaKnown RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 TCTE1Q5JU00 501 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 ZNF517Q6ZMY9 492 aaPredicted RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 CCDC81Q6ZN84 652 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 ENDOVQ8N8Q3 282 aaKnown RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 KCT2Q8NC54 265 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 AICDAQ9GZX7 198 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 MRPL46Q9H2W6 279 aaKnown RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 OPTCQ9UBM4 332 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 SRPK3Q9UPE1 567 aa20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 KMT2BQ9UMN6 2715 aaPredicted RBP20.68■□□□□ 0.9
CDC42EP4-203ENST00000578516 A0A1B0GX78 115 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 C4orf51C9J302 202 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 K7EPI3 171 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 NKX2-8O15522 239 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 RBP1P09455 135 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 FURINP09958 794 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 HRH2P25021 359 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 SCTRP47872 440 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 ALDH18A1P54886 795 aaKnown RBP20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 DOC2AQ14183 400 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 RASA2Q15283 850 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 XKR6Q5GH73 641 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 ASPGQ86U10 573 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 ACMSDQ8TDX5 336 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 STARD8Q92502 1023 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 KIAA1143Q96AT1 154 aaPredicted RBP20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 MRPL57Q9BQC6 102 aaKnown RBP20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 ACTL8Q9H568 366 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 LGALS13Q9UHV8 139 aa20.67■□□□□ 0.9
CDC42EP4-203ENST00000578516 A0A0A6YYC8 382 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 I3L1I5 382 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 CLGNO14967 610 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 KLK3P07288 261 aaPredicted RBP20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 CREB1P16220 341 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 IL1RNP18510 177 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 TSPAN8P19075 237 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 GNAZP19086 355 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 RELAQ04206 551 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 CHIT1Q13231 466 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 IL10RAQ13651 578 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 SYT16Q17RD7 645 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 NKAIN1Q4KMZ8 207 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 MLIPQ5VWP3 458 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 ATG9BQ674R7 924 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 GOLGA7Q7Z5G4 137 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 VN1R5Q7Z5H4 357 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 TM4SF19Q96DZ7 209 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 ZIM3Q96PE6 472 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 AIF1LQ9BQI0 150 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 PRORYQ9H606 182 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 CTSFQ9UBX1 484 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 NUP210LQ5VU65 1888 aa20.66■□□□□ 0.9
CDC42EP4-203ENST00000578516 CFAP47Q6ZTR5 3102 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 ZNF860A6NHJ4 632 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 K7ENP7 123 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 E2F3O00716 465 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 NDUFS4O43181 175 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 FOXS1O43638 330 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 SMIM24O75264 130 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 HBQ1P09105 142 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 GRK3P35626 688 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 HNF4AP41235 474 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 MAT1AQ00266 395 aaKnown RBP20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 VAC14Q08AM6 782 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 NCF4Q15080 339 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 PCBP2Q15366 365 aaKnown RBP eCLIP20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 KRT71Q3SY84 523 aa20.65■□□□□ 0.9
CDC42EP4-203ENST00000578516 INO80CQ6PI98 192 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms