RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 DMRTC2Q8IXT2 367 aaPredicted RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 LGI4Q8N135 537 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 EID3Q8N140 333 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 MARVELD2Q8N4S9 558 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 FAM98AQ8NCA5 519 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 OR51Q1Q8NH59 317 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 LILRB4Q8NHJ6 448 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 BIRC8Q96P09 236 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 CXXC4Q9H2H0 198 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ETNK1Q9HBU6 452 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 CHRAC1Q9NRG0 131 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 UTP6Q9NYH9 597 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 LRFN1Q9P244 771 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 TAC3Q9UHF0 121 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 PCYOX1Q9UHG3 505 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 DUSP10Q9Y6W6 482 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 PRRC2AP48634 2157 aaKnown RBP9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 ACANP16112 2415 aa9.39□□□□□ -0.91
CALCOCO2-227ENST00000575560 HEATR5BQ9P2D3 2071 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 KCNE1BA0A087WTH5 132 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 GOLGA6L9A6NEM1 432 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 FOXO6A8MYZ6 492 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 E7ENX8 843 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 HAT1O14929 419 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 NME2P1O60361 137 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 NDUFS3O75489 264 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 TOXO94900 526 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 ZNF24P17028 368 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 NME2P22392 152 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 STIP1P31948 543 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 PTGER1P34995 402 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 BCL6P41182 706 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 XCR1P46094 333 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 PNLIPRP1P54315 467 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 ABATP80404 500 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 OC90Q02509 493 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 TAP2Q03519 686 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 MAPKAPK3Q16644 382 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 MINDY4Q4G0A6 757 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 CTSL3PQ5NE16 218 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 MFSD4BQ5TF39 518 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 ZNF468Q5VIY5 522 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 PPP1R21Q6ZMI0 780 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 PLD3Q8IV08 490 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 CCDC170Q8IYT3 715 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 MPP5Q8N3R9 675 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 CPSF7Q8N684 471 aaKnown RBP9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 SLC5A8Q8N695 610 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 LRRC57Q8N9N7 239 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 PLPP5Q8NEB5 264 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 FAM57AQ8TBR7 257 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 ZNF480Q8WV37 535 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 PKP4Q99569 1192 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 TRIM45Q9H8W5 580 aaPredicted RBP9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 TREX1Q9NSU2 369 aa9.38□□□□□ -0.91
CALCOCO2-227ENST00000575560 TCRBV7S2A1N4TA0A589 114 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 SLC25A12O75746 678 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 FAM155BO75949 473 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 CCNDBP1O95273 360 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 SLC16A8O95907 504 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 HOXD4P09016 255 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 MSX1P28360 303 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 CHRNB4P30926 498 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 PTGS2P35354 604 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 FDFT1P37268 417 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 IST1P53990 364 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 ADARP55265 1226 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 EIF3BP55884 814 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 RHAGQ02094 409 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 SPA17Q15506 151 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 NSDHLQ15738 373 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 SFT2D3Q587I9 215 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 PCID2Q5JVF3 399 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 TMEM211Q6ICI0 200 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 TMEM214Q6NUQ4 689 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 PAPD4Q6PIY7 484 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 CEP128Q6ZU80 1094 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 VN1R4Q7Z5H5 301 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 RPS19BP1Q86WX3 136 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 TGIF2LYQ8IUE0 185 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 LRRC56Q8IYG6 542 aaPredicted RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 MMP21Q8N119 569 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 TC2NQ8N9U0 490 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 PPFIBP2Q8ND30 876 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 MCOLN3Q8TDD5 553 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 ELP5Q8TE02 316 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 ASB5Q8WWX0 329 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 NRGNQ92686 78 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 TM4SF19Q96DZ7 209 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 LPAR4Q99677 370 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 EBNA1BP2Q99848 306 aaKnown RBP9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 FOXC2Q99958 501 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 UCK2Q9BZX2 261 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 CDCP1Q9H5V8 836 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 FAM114A2Q9NRY5 505 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 LANCL2Q9NS86 450 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 HCN3Q9P1Z3 774 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 GALPQ9UBC7 116 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 KCNN3Q9UGI6 736 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms