RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PDE1CQ14123 709 aaPredicted RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 KYAT1Q16773 422 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 C9orf64Q5T6V5 341 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SERTAD4-AS1Q5TG53 156 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 NUGGCQ68CJ6 796 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ITPRIPL1Q6GPH6 555 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 RFWD3Q6PCD5 774 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SCARA5Q6ZMJ2 495 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 RUFY3Q7L099 469 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 KDELC2Q7Z4H8 507 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 TADA2BQ86TJ2 420 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ACOT1Q86TX2 421 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SLC22A18ASQ8N1D0 253 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 C12orf29Q8N999 325 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 OR4N2Q8NGD1 307 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ITFG2Q969R8 447 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF274Q96GC6 653 aaPredicted RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SIGLEC11Q96RL6 698 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 TUBB6Q9BUF5 446 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 HEMGNQ9BXL5 484 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 MUC13Q9H3R2 512 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 EHD2Q9NZN4 543 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SEPT10Q9P0V9 454 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 SUN2Q9UH99 717 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ERRFI1Q9UJM3 462 aaPredicted RBP5.26□□□□□ -1.57
SF3B3-214ENST00000572365 PCDHGB5Q9Y5G0 923 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 ACANP16112 2415 aa5.26□□□□□ -1.57
SF3B3-214ENST00000572365 CNTRLQ7Z7A1 2325 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CBY3A6NI87 242 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 FAM157AC9JC47 383 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 RNF103O00237 685 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TP73O15350 636 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TIMM44O43615 452 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 PTP4A3O75365 173 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 RBMXL2O75526 392 aaKnown RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TMCC1O94876 653 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CCNDBP1O95273 360 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 HEXAP06865 529 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TMEM191BP0C7N4 346 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ALPPL2P10696 532 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 GOT1P17174 413 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 POLR2EP19388 210 aaKnown RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 HOXD9P28356 352 aaPredicted RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CPA2P48052 419 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 STK19P49842 368 aaPredicted RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 SLC18A2Q05940 514 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 GOLGA8DPQ0D2H9 430 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CNTN1Q12860 1018 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 DAZAP2Q15038 168 aaPredicted RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ZSCAN26Q16670 478 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 EDRF1Q3B7T1 1238 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 LACTB2Q53H82 288 aaPredicted RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ALG10Q5BKT4 473 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ALG10BQ5I7T1 473 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TPRG1LQ5T0D9 272 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 KRT79Q5XKE5 535 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 Q6ZSR6 202 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 MOB3CQ70IA8 216 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 SCD5Q86SK9 330 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 GPBP1Q86WP2 473 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CCDC83Q8IWF9 413 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 SFTPA2Q8IWL1 248 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 MCEMP1Q8IX19 187 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 SLC35F3Q8IY50 421 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 RBFAQ8N0V3 343 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 MOCOSQ96EN8 888 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TSPAN18Q96SJ8 248 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 PIP5K1AQ99755 562 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ITPAQ9BY32 194 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ADNPQ9H2P0 1102 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 SMYD3Q9H7B4 428 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 C17orf75Q9HAS0 396 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 FAM49BQ9NUQ9 324 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 TMEM45AQ9NWC5 275 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 RBAKQ9NYW8 714 aaPredicted RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 NLGN3Q9NZ94 848 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CYTH4Q9UIA0 394 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 GGA2Q9UJY4 613 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 LOXL2Q9Y4K0 774 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
SF3B3-214ENST00000572365 CHD5Q8TDI0 1954 aa5.25□□□□□ -1.57
SF3B3-214ENST00000572365 FER1L5A0AVI2 2057 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 PRRC2AP48634 2157 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 A0A087WUV0 522 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 EME2A4GXA9 379 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 NEMP2A6NFY4 417 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 EFCAB7A8K855 629 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 TCP11X1B4DZS4 312 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 KRT86O43790 486 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 DOK2O60496 412 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 TBL1XO60907 577 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 RNASEH1O60930 286 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 SLU7O95391 586 aaKnown RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 NADKO95544 446 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 MLYCDO95822 493 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 PIGRP01833 764 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 GP1BAP07359 652 aa5.24□□□□□ -1.57
SF3B3-214ENST00000572365 UNGP13051 313 aaPredicted RBP5.24□□□□□ -1.57
SF3B3-214ENST00000572365 DRD3P35462 400 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms