RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 VSIG8P0DPA2 414 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 CPA2P48052 419 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 ME1P48163 572 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF165P49910 485 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 WNT3P56703 355 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 GALNT2Q10471 571 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 BECN1Q14457 450 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 SFT2D3Q587I9 215 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 AWAT1Q58HT5 328 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 PPP6R3Q5H9R7 873 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 GARNL3Q5VVW2 1013 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 NSUN5P2Q63ZY6 315 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 KCTD11Q693B1 232 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 FAM166AQ6J272 317 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 TMCO3Q6UWJ1 677 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 GK5Q6ZS86 529 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 SH2D5Q6ZV89 423 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 PCGF5Q86SE9 256 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 SLC26A11Q86WA9 606 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 PSTKQ8IV42 348 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 OR4N4Q8N0Y3 316 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 KIF2BQ8N4N8 673 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 NUP43Q8NFH3 380 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 OR10H5Q8NGA6 315 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 FATE1Q969F0 183 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 CABS1Q96KC9 395 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 SPATA13Q96N96 652 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 ZWILCHQ9H900 591 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 SH2D2AQ9NP31 389 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 LAMP3Q9UQV4 416 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 DRG1Q9Y295 367 aaKnown RBP6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 TTLL3Q9Y4R7 772 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 KLK4Q9Y5K2 254 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 DUSP10Q9Y6W6 482 aa6.11□□□□□ -1.43
HERPUD1-217ENST00000569429 WNK2Q9Y3S1 2297 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 SACSQ9NZJ4 4579 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 A0A0J9YVX5 310 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 GLYATL1P3A0A0U1RQE8 302 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ATP6AP2A0A1C7CYW4 349 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 TCRBV5S1A1TA0A578 114 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 MBD3L3A6NE82 208 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 CD8B2A6NJW9 211 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ELOA3DA6NLF2 546 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 KDM1AO60341 852 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ATP6AP2O75787 350 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 SERPINC1P01008 464 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 IGHV4-39P01824 125 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 EIF2S1P05198 315 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 HLA-DQB2P05538 268 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 PFKFB1P16118 471 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 DESP17661 470 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ACADLP28330 430 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 SERPINB6P35237 376 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ARL4AP40617 200 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 KRT85P78386 507 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 MPP1Q00013 466 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 MAT1AQ00266 395 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ACTN3Q08043 901 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 PTK6Q13882 451 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 SF3B4Q15427 424 aaKnown RBP eCLIP6.1□□□□□ -1.432e-6■■■■□ 20
HERPUD1-217ENST00000569429 PCSK7Q16549 785 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ELOA3BQ3SY89 546 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 MINDY4Q4G0A6 757 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF658Q5TYW1 1059 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF449Q6P9G9 518 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 SUSD1Q6UWL2 747 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 FAM151BQ6UXP7 276 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 GBP6Q6ZN66 633 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ZNF704Q6ZNC4 412 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 RNF44Q7L0R7 432 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 LUZP2Q86TE4 346 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 NT5DC3Q86UY8 548 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 TMEM156Q8N614 296 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 LINC01555Q8NAE3 123 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 PLPP5Q8NEB5 264 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ELOA3Q8NG57 546 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 OR5K2Q8NHB8 316 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 MBD3L2Q8NHZ7 208 aaPredicted RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 FAM216AQ8WUB2 273 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 NAT14Q8WUY8 206 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 REPS1Q96D71 796 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 PEBP4Q96S96 227 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 PHACTR1Q9C0D0 580 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 VPS16Q9H269 839 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 EXO5Q9H790 373 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 CHODLQ9H9P2 273 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 SIX2Q9NPC8 291 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 KLHL28Q9NXS3 571 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 HPSEQ9Y251 543 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 ASF1AQ9Y294 204 aa6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 TDRKHQ9Y2W6 561 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-217ENST00000569429 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
HERPUD1-217ENST00000569429 A0A0A6YYC8 382 aaPredicted RBP6.09□□□□□ -1.43
HERPUD1-217ENST00000569429 A0A0G2JMM0 328 aa6.09□□□□□ -1.43
HERPUD1-217ENST00000569429 A0A1B0GVL5 298 aa6.09□□□□□ -1.43
HERPUD1-217ENST00000569429 A0A1W2PPB8 328 aa6.09□□□□□ -1.43
HERPUD1-217ENST00000569429 A0A1W2PRS3 328 aa6.09□□□□□ -1.43
HERPUD1-217ENST00000569429 FAM234BA2RU67 622 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms