RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CATSPEREQ5SY80 951 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 CRTC3Q6UUV7 619 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ZC3H7AQ8IWR0 971 aaKnown RBP8.47□□□□□ -1.05
LINC00558-201ENST00000569422 OR4K1Q8NGD4 311 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 OR8H1Q8NGG4 311 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 LMLNQ96KR4 655 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 FRMD6Q96NE9 622 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 MBOAT4Q96T53 435 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 FBXO10Q9UK96 956 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 ORC6Q9Y5N6 252 aa8.47□□□□□ -1.05
LINC00558-201ENST00000569422 KCNE1BA0A087WTH5 132 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 A0A096LPI6 279 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 LOC100130705A0A1B0GUX0 176 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 EPN2O95208 641 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 TGFB1P01137 390 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 ANXA4P09525 319 aaPredicted RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 JUPP14923 745 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 SYN1P17600 705 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 MAPK1P28482 360 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 IRS1P35568 1242 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 HNMTP50135 292 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 HLCSP50747 726 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 RAC1P63000 192 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 ANKDD1AQ495B1 522 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 TTC23Q5W5X9 447 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 PRR23BQ6ZRT6 265 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 USP51Q70EK9 711 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 BTN2A1Q7KYR7 527 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 GPR149Q86SP6 731 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 REM2Q8IYK8 340 aaPredicted RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 RELTQ969Z4 430 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 TOX2Q96NM4 488 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 OR4K3Q96R72 315 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 RBM4BQ9BQ04 359 aaKnown RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 TMEM121BQ9BXQ6 578 aaPredicted RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 CPEB1Q9BZB8 566 aaKnown RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 LHPPQ9H008 270 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 OR2AG1Q9H205 316 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 RUBCNLQ9H714 662 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 IL36AQ9UHA7 158 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 ZNF639Q9UID6 485 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 PNMA8BQ9ULN7 279 aaPredicted RBP8.46□□□□□ -1.05
LINC00558-201ENST00000569422 PLAGL1Q9UM63 463 aa8.46□□□□□ -1.05
LINC00558-201ENST00000569422 KRBA1A5PL33 1030 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 MGAT4DA6NG13 374 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 GFYI3L273 518 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 ALDH4A1P30038 563 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 VIPR2P41587 438 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 RPS13P62277 151 aaKnown RBP8.46□□□□□ -1.06
LINC00558-201ENST00000569422 RAPSNQ13702 412 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 DGCR6Q14129 220 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 ARHGAP15Q53QZ3 475 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 PLEKHS1Q5SXH7 462 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 BROXQ5VW32 411 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 ATG9BQ674R7 924 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 BRAT1Q6PJG6 821 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 HORMAD1Q86X24 394 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 C12orf76Q8N812 135 aaPredicted RBP8.46□□□□□ -1.06
LINC00558-201ENST00000569422 ATG16L2Q8NAA4 619 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 POF1BQ8WVV4 589 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 CLP1Q92989 425 aaKnown RBP8.46□□□□□ -1.06
LINC00558-201ENST00000569422 UBE2FQ969M7 185 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 CCDC115Q96NT0 180 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 PKP4Q99569 1192 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 RHNO1Q9BSD3 238 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 PDP1Q9P0J1 537 aaPredicted RBP8.46□□□□□ -1.06
LINC00558-201ENST00000569422 KIF17Q9P2E2 1029 aa8.46□□□□□ -1.06
LINC00558-201ENST00000569422 STOX2Q9P2F5 926 aaPredicted RBP8.46□□□□□ -1.06
LINC00558-201ENST00000569422 CFAP20Q9Y6A4 193 aaKnown RBP8.46□□□□□ -1.06
LINC00558-201ENST00000569422 IGLV3-16A0A075B6K0 115 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 H0YAE9 185 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 RECQL5O94762 991 aaPredicted RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 MYO1DO94832 1006 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 APBB3O95704 486 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 IL33O95760 270 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CATP04040 527 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PTPN2P17706 415 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CRHBPP24387 322 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 IGFBP5P24593 272 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 EPHA2P29317 976 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CRATP43155 626 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SEPHS1P49903 392 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 NUP107P57740 925 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 VLDLRP98155 873 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PPP2R2BQ00005 443 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 MC1RQ01726 317 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 C6orf141Q5SZD1 244 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 RAET1GQ6H3X3 334 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SLC44A2Q8IWA5 706 aaPredicted RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SFTPA1Q8IWL2 248 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TCAIMQ8N3R3 496 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 L3MBTL4Q8NA19 623 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OR52J3Q8NH60 311 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OR5AK3PQ8NH89 298 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 GLYATL1Q969I3 302 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 NEIL2Q969S2 332 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms