RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PHF12Q96QT6 1004 aa12.93□□□□□ -0.34
CNOT1-215ENST00000569020 C20orf96Q9NUD7 363 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-215ENST00000569020 STMN3Q9NZ72 180 aa12.93□□□□□ -0.34
CNOT1-215ENST00000569020 COPG2Q9UBF2 871 aa12.93□□□□□ -0.34
CNOT1-215ENST00000569020 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
CNOT1-215ENST00000569020 KCNE1BA0A087WTH5 132 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 ARHGAP10A1A4S6 786 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 PRAMEF2O60811 474 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 STATHP02808 62 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 PTK6Q13882 451 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 BTBD16Q32M84 506 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 TTC27Q6P3X3 843 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 TMEM207Q6UWW9 146 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 PIWIL4Q7Z3Z4 852 aaKnown RBP12.92□□□□□ -0.34
CNOT1-215ENST00000569020 CPEB2Q7Z5Q1 589 aaKnown RBP12.92□□□□□ -0.34
CNOT1-215ENST00000569020 PALM2Q8IXS6 379 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 CAMKVQ8NCB2 501 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 OR51Q1Q8NH59 317 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 MAGOHBQ96A72 148 aaKnown RBP12.92□□□□□ -0.34
CNOT1-215ENST00000569020 THAP11Q96EK4 314 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 CCDC138Q96M89 665 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 CYTH2Q99418 400 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 FAM167BQ9BTA0 163 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 VN1R1Q9GZP7 353 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 PCBD2Q9H0N5 130 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 RUBCNLQ9H714 662 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 ABI3Q9P2A4 366 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 SUCOQ9UBS9 1254 aaKnown RBP12.92□□□□□ -0.34
CNOT1-215ENST00000569020 SEC14L3Q9UDX4 400 aa12.92□□□□□ -0.34
CNOT1-215ENST00000569020 TRGV8A0A0C4DH27 118 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 A8MUI8 341 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 SEC24DO94855 1032 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-215ENST00000569020 HAUS5O94927 633 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 UNC5CO95185 931 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 C8GP07360 202 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 IL1RNP18510 177 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 TNFRSF8P28908 595 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 GRK3P35626 688 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 XCR1P46094 333 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 RGS4P49798 205 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 AGTR2P50052 363 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 EFNA3P52797 238 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 MPP1Q00013 466 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 RBPJQ06330 500 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 CCDC137Q6PK04 289 aaKnown RBP12.91□□□□□ -0.34
CNOT1-215ENST00000569020 PRSS41Q7RTY9 318 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 VN1R4Q7Z5H5 301 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 C17orf64Q86WR6 236 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.91□□□□□ -0.34
CNOT1-215ENST00000569020 GABPB2Q8TAK5 448 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-215ENST00000569020 ZNF354BQ96LW1 612 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 AARSD1Q9BTE6 412 aaKnown RBP12.91□□□□□ -0.34
CNOT1-215ENST00000569020 FAM129AQ9BZQ8 928 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 ANKHQ9HCJ1 492 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 TRMT6Q9UJA5 497 aaKnown RBP12.91□□□□□ -0.34
CNOT1-215ENST00000569020 FBXO5Q9UKT4 447 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 MYO7BQ6PIF6 2116 aa12.91□□□□□ -0.34
CNOT1-215ENST00000569020 IGHV3-20A0A0C4DH32 117 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 NRDCO43847 1150 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 HIST1H2AGP0C0S8 130 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 SLC35G6P0C7Q6 338 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 HIST1H2ADP20671 130 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 CCND1P24385 295 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 COILP38432 576 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 BCL6P41182 706 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 MAGEA3P43357 314 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 CSNK1G2P78368 415 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 SP140Q13342 867 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.9□□□□□ -0.349e-9■□□□□ 9.8
CNOT1-215ENST00000569020 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ZNF766Q5HY98 468 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 PLAG1Q6DJT9 500 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 TMEM214Q6NUQ4 689 aaKnown RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ASPGQ86U10 573 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 SRRM1Q8IYB3 904 aaKnown RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 MYO1HQ8N1T3 1032 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 RASGEF1CQ8N431 466 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ZCCHC10Q8TBK6 192 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ALKBH8Q96BT7 664 aaKnown RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 PBKQ96KB5 322 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 HIST1H2AHQ96KK5 128 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 SIGLEC10Q96LC7 697 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 HIST1H2AJQ99878 128 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 MACROD1Q9BQ69 325 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 H2AFJQ9BTM1 129 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ATG10Q9H0Y0 220 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 KCNK13Q9HB14 408 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 IARS2Q9NSE4 1012 aaKnown RBP12.9□□□□□ -0.34
CNOT1-215ENST00000569020 TAS2R13Q9NYV9 303 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 HCN3Q9P1Z3 774 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 ADAMTS6Q9UKP5 1117 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 PDE10AQ9Y233 779 aa12.9□□□□□ -0.34
CNOT1-215ENST00000569020 FEZF1A0PJY2 475 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms