RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 NDUFAF7Q7L592 441 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 PCGF5Q86SE9 256 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 C17orf64Q86WR6 236 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 KBTBD2Q8IY47 623 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 KCT2Q8NC54 265 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 OR1N1Q8NGS0 311 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 VPS50Q96JG6 964 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 OLFM1Q99784 485 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 RBCK1Q9BYM8 510 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 PARVBQ9HBI1 364 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 PLEKHB1Q9UF11 243 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 ERRFI1Q9UJM3 462 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 PYCARDQ9ULZ3 195 aa11.59□□□□□ -0.55
GTF3C1-208ENST00000567843 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 PRPF4O43172 522 aaKnown RBP eCLIP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 PIAS1O75925 651 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 TSPAN12O95859 305 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 B3GALT4O96024 378 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 SERPIND1P05546 499 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 C8GP07360 202 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 HIST1H2AGP0C0S8 130 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 PRR35P0CG20 571 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 HIST1H2ADP20671 130 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 COL8A1P27658 744 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 EMP3P54852 163 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 RPS15AP62244 130 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 ARG2P78540 354 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 MFAP5Q13361 173 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 ELOAQ14241 798 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 ZNF169Q14929 603 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 FASTKD3Q14CZ7 662 aaKnown RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 NDUFA9Q16795 377 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 C4orf17Q53FE4 359 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 IGFL2Q6UWQ7 119 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 CAPN12Q6ZSI9 719 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 LANCL3Q6ZV70 420 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 SLC26A11Q86WA9 606 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 CREG2Q8IUH2 290 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 GRHL3Q8TE85 626 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 PPP4R1Q8TF05 950 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 PSMF1Q92530 271 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 SLCO2A1Q92959 643 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 MOCOSQ96EN8 888 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 MVB12AQ96EY5 273 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 HIST1H2AHQ96KK5 128 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 MAGEB10Q96LZ2 347 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 HIST1H2AJQ99878 128 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 H2AFJQ9BTM1 129 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 MKKSQ9NPJ1 570 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 ARL15Q9NXU5 204 aa11.58□□□□□ -0.56
GTF3C1-208ENST00000567843 NBPF19A0A087WUL8 3843 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SCN3AQ9NY46 2000 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 IGHV1-45A0A0A0MS14 117 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 PABPN1LA6NDY0 278 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 A8MUI8 341 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 EIF3FO00303 357 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 TXNDC9O14530 226 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SLC16A5O15375 505 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 DNAJB6O75190 326 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 RDH16O75452 317 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 WFS1O76024 890 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SEC24DO94855 1032 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 BMP10O95393 424 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SERPINA7P05543 415 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 ITGAMP11215 1152 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 NPPBP16860 134 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 VARSP26640 1264 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 IL2P60568 153 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 PDIA2Q13087 525 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 ZNF460Q14592 562 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 MORF4L2Q15014 288 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 PCOLCEQ15113 449 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 CATSPEREQ5SY80 951 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 CAPN13Q6MZZ7 669 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 LRRC8EQ6NSJ5 796 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 HIBCHQ6NVY1 386 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 TMEM207Q6UWW9 146 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 ASPGQ86U10 573 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 PDSS2Q86YH6 399 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 ZNF740Q8NDX6 193 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 OR51Q1Q8NH59 317 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 GABPB2Q8TAK5 448 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SLC13A3Q8WWT9 602 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 KRT12Q99456 494 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 NAPGQ99747 312 aaPredicted RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 NAT9Q9BTE0 207 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SGPP1Q9BX95 441 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 UNKQ9C0B0 810 aaKnown RBP11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 VN1R1Q9GZP7 353 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 AGPAT4Q9NRZ5 378 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 C14orf105Q9NVL8 296 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 RIC8BQ9NVN3 520 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 VWA7Q9Y334 891 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SNX24Q9Y343 169 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 PSAT1Q9Y617 370 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 TEX264Q9Y6I9 313 aa11.57□□□□□ -0.56
GTF3C1-208ENST00000567843 UNC79Q9P2D8 2635 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms