RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C17orf64Q86WR6 236 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 CEP97Q8IW35 865 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ZC3H7AQ8IWR0 971 aaKnown RBP13.9□□□□□ -0.18
FANCA-220ENST00000566409 ZBED8Q8IZ13 594 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 KCT2Q8NC54 265 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 GALNT11Q8NCW6 608 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 OR9A4Q8NGU2 314 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 OR56A3Q8NH54 315 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ANKRD49Q8WVL7 239 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 DPH5Q9H2P9 285 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ARL15Q9NXU5 204 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 GRHL1Q9NZI5 618 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 ZFATQ9P243 1243 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 B3GNT3Q9Y2A9 372 aa13.9□□□□□ -0.18
FANCA-220ENST00000566409 FAM95CA0A1B0GW59 222 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 A0A1W2PQ72 361 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 TCP11X1B4DZS4 312 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 CDC7O00311 574 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 JRKO75564 520 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 IPO13O94829 963 aaKnown RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 KLHL18O94889 574 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 GUCA1CO95843 209 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 HPP00738 406 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 HIST1H2AGP0C0S8 130 aaPredicted RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 COX6A1P12074 109 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 ACPPP15309 386 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 HIST1H2ADP20671 130 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 SAT1P21673 171 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 CCND1P24385 295 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 SSTR1P30872 391 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 EMP2P54851 167 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 AP1S2P56377 157 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 TRADDQ15628 312 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 DUPD1Q68J44 220 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 FAAH2Q6GMR7 532 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 CAPN13Q6MZZ7 669 aaPredicted RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 TMEM214Q6NUQ4 689 aaKnown RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 CUZD1Q86UP6 607 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 SLC26A11Q86WA9 606 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 PDSS2Q86YH6 399 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 ABHD11Q8NFV4 315 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 OR4K1Q8NGD4 311 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 PSMF1Q92530 271 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 FBXL8Q96CD0 374 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 SNRNP40Q96DI7 357 aaKnown RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 MOCOSQ96EN8 888 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 THOC3Q96J01 351 aaKnown RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 HIST1H2AHQ96KK5 128 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 HIST1H2AJQ99878 128 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 H2AFJQ9BTM1 129 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 YIPF2Q9BWQ6 316 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 LHPPQ9H008 270 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 SPNS1Q9H2V7 528 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 ZNF160Q9HCG1 818 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 MKKSQ9NPJ1 570 aaPredicted RBP13.89□□□□□ -0.19
FANCA-220ENST00000566409 WHRNQ9P202 907 aa13.89□□□□□ -0.19
FANCA-220ENST00000566409 CTAGE15A4D2H0 777 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 FAM187AA6NFU0 413 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CXorf49A8MYA2 514 aaPredicted RBP13.88□□□□□ -0.19
FANCA-220ENST00000566409 PRPF4O43172 522 aaKnown RBP eCLIP13.88□□□□□ -0.195e-9■■■■■ 30.1
FANCA-220ENST00000566409 VPS4BO75351 444 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 WISP3O95389 354 aaPredicted RBP13.88□□□□□ -0.19
FANCA-220ENST00000566409 BMP10O95393 424 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 C1QAP02745 245 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CELA2AP08217 269 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 ANXA5P08758 320 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 IL1RNP18510 177 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CATSPEREQ5SY80 951 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 TMEM205Q6UW68 189 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CAPN12Q6ZSI9 719 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CTAGE6Q86UF2 777 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 ZADH2Q8N4Q0 377 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CISD2Q8N5K1 135 aaKnown RBP13.88□□□□□ -0.19
FANCA-220ENST00000566409 MFSD9Q8NBP5 474 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 ZNF740Q8NDX6 193 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 THAP11Q96EK4 314 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 SARGQ9BW04 601 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 C14orf105Q9NVL8 296 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 ASF1BQ9NVP2 202 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 VPS4AQ9UN37 437 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 NTNG1Q9Y2I2 539 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 CPAMD8Q8IZJ3 1885 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 DOPEY1Q5JWR5 2465 aa13.88□□□□□ -0.19
FANCA-220ENST00000566409 LOC102723996A0A087X1L8 192 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 IGHV1-45A0A0A0MS14 117 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NPEPPSL1A6NEC2 478 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 OR2W5A6NFC9 320 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 H0YIG0 161 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 SGK494L7N484 410 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 MAP2K7O14733 419 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 KLHL41O60662 606 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 NSA2O95478 260 aaKnown RBP13.87□□□□□ -0.19
FANCA-220ENST00000566409 HEXBP07686 556 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 ENO2P09104 434 aaPredicted RBP13.87□□□□□ -0.19
FANCA-220ENST00000566409 AVPR1BP47901 424 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 CCR8P51685 355 aa13.87□□□□□ -0.19
FANCA-220ENST00000566409 ETF1P62495 437 aaKnown RBP13.87□□□□□ -0.19
FANCA-220ENST00000566409 EEF1A2Q05639 463 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms