RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SLITRK4Q8IW52 837 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 WDR75Q8IWA0 830 aaKnown RBP7.46□□□□□ -1.22
CDH1-208ENST00000565810 LAS2Q8IYD9 372 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 D2HGDHQ8N465 521 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 ZNF781Q8N8C0 355 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 CAMKVQ8NCB2 501 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 RCBTB1Q8NDN9 531 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 TRPV3Q8NET8 790 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 OR7G3Q8NG95 312 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 PIWIL2Q8TC59 973 aaKnown RBP7.46□□□□□ -1.22
CDH1-208ENST00000565810 AGR3Q8TD06 166 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 MTFMTQ96DP5 389 aaKnown RBP7.46□□□□□ -1.22
CDH1-208ENST00000565810 SLC41A2Q96JW4 573 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 FRG2BQ96QU4 278 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 SORT1Q99523 831 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 CCT7Q99832 543 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 CENPKQ9BS16 269 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 C20orf27Q9GZN8 174 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 NSRP1Q9H0G5 558 aaKnown RBP7.46□□□□□ -1.22
CDH1-208ENST00000565810 RHBGQ9H310 441 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 ZNF395Q9H8N7 513 aaPredicted RBP7.46□□□□□ -1.22
CDH1-208ENST00000565810 SLCO1B3Q9NPD5 702 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 PNPOQ9NVS9 261 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 ZFP69BQ9UJL9 534 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 SERTAD3Q9UJW9 196 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 ZNF225Q9UK10 706 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 ZNF490Q9ULM2 529 aaPredicted RBP7.46□□□□□ -1.22
CDH1-208ENST00000565810 TIMM22Q9Y584 194 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 PCDHGA4Q9Y5G9 962 aa7.46□□□□□ -1.22
CDH1-208ENST00000565810 ADAMTS9Q9P2N4 1935 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 TRPC5OSA6NMA1 111 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 H0YGG7 62 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SLC28A1O00337 649 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 FOXE1O00358 373 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 MANBAO00462 879 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CASC3O15234 703 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 HDAC3O15379 428 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 ZSCAN9O15535 394 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 NDUFS4O43181 175 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 RGS14O43566 566 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 LCMT2O60294 686 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 PRAMEF10O60809 474 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 EDF1O60869 148 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 CTSVO60911 334 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CSO75390 466 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 CLEC3AO75596 197 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 DKK1O94907 266 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SERPINA6P08185 405 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 TROVE2P10155 538 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDH1-208ENST00000565810 HSD3B1P14060 373 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CD22P20273 847 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 PTX3P26022 381 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 HSD3B2P26439 372 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SERPINB3P29508 390 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 ARRB2P32121 409 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 LSP1P33241 339 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 BCL6P41182 706 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 PIK3CBP42338 1070 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 FOXA1P55317 472 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 VSX2P58304 361 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 ARF3P61204 181 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 STXBP1P61764 594 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 CYP4F2P78329 520 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 TGM3Q08188 693 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 PWP1Q13610 501 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 ISXQ2M1V0 245 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 DEFB110Q30KQ9 67 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 HES3Q5TGS1 186 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CDCP2Q5VXM1 449 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CES4AQ5XG92 561 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 KANK2Q63ZY3 851 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CLEC6AQ6EIG7 209 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CHSY3Q70JA7 882 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 RNF44Q7L0R7 432 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 TMPRSS9Q7Z410 1059 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 ALYREFQ86V81 257 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 TMPRSS12Q86WS5 348 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 DDIASQ8IXT1 998 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDH1-208ENST00000565810 GPR135Q8IZ08 494 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CACTIN-AS1Q8N1I8 211 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 GALNT15Q8N3T1 639 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 DNAJC22Q8N4W6 341 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CSNK1A1LQ8N752 337 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 GBP7Q8N8V2 638 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 TTC29Q8NA56 475 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 ZNF740Q8NDX6 193 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SRFBP1Q8NEF9 429 aaKnown RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 HUS1BQ8NHY5 278 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 TWIST2Q8WVJ9 160 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SLC13A3Q8WWT9 602 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 USP7Q93009 1102 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CMTM7Q96FZ5 175 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 CHMP6Q96FZ7 201 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 FCRL4Q96PJ5 515 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 OR2A5Q96R48 311 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 KCNA7Q96RP8 456 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SERPINI1Q99574 410 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms