RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SBK3P0C264 359 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 FAM87AP0C7U9 286 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 AGXTP21549 392 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 SLC26A3P40879 764 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 HNMTP50135 292 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 SERPINB9P50453 376 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 CCR8P51685 355 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 EFNA3P52797 238 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 ARSFP54793 590 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 RPS15P62841 145 aaKnown RBP13.23□□□□□ -0.29
TPM1-230ENST00000561266 REEP5Q00765 189 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 NAA25Q14CX7 972 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 UGT8Q16880 541 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 SYT16Q17RD7 645 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 CRTC2Q53ET0 693 aaPredicted RBP13.23□□□□□ -0.29
TPM1-230ENST00000561266 TECRLQ5HYJ1 363 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 FAM219BQ5XKK7 198 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 SULT1C3Q6IMI6 304 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 ADNP2Q6IQ32 1131 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 NXPE4Q6UWF7 544 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 SLCO4C1Q6ZQN7 724 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 SHISA6Q6ZSJ9 500 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 TMPRSS11BQ86T26 416 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 AMER2Q8N7J2 671 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 AMER3Q8N944 861 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 MFSD9Q8NBP5 474 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 STAG3L4Q8TBR4 150 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 MZB1Q8WU39 189 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 UBL7Q96S82 380 aaPredicted RBP13.23□□□□□ -0.29
TPM1-230ENST00000561266 DPH2Q9BQC3 489 aaPredicted RBP13.23□□□□□ -0.29
TPM1-230ENST00000561266 SARGQ9BW04 601 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 WWOXQ9NZC7 414 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
TPM1-230ENST00000561266 CTSFQ9UBX1 484 aa13.23□□□□□ -0.29
TPM1-230ENST00000561266 A0A0A6YYC8 382 aaPredicted RBP13.22□□□□□ -0.29
TPM1-230ENST00000561266 SUPT3HB4E1H0 165 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 C4orf51C9J302 202 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 I3L1I5 382 aaPredicted RBP13.22□□□□□ -0.29
TPM1-230ENST00000561266 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 OR1F1O43749 312 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 SUPT3HO75486 399 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 C1QL1O75973 258 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 CD22P20273 847 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 HRH2P25021 359 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 SCTRP47872 440 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 RPS15AP62244 130 aaKnown RBP13.22□□□□□ -0.29
TPM1-230ENST00000561266 HYAL2Q12891 473 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 CHAF1BQ13112 559 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 NKG7Q16617 165 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 FAM214AQ32MH5 1076 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 CDKL4Q5MAI5 379 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 CPZQ66K79 652 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 OVCH1Q7RTY7 1134 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 SYVN1Q86TM6 617 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 CYP4X1Q8N118 509 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 TMEM151AQ8N4L1 468 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 CABS1Q96KC9 395 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 SPSB2Q99619 263 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 GEMIN8Q9NWZ8 242 aaKnown RBP13.22□□□□□ -0.29
TPM1-230ENST00000561266 TLK1Q9UKI8 766 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 PTRH2Q9Y3E5 179 aaKnown RBP13.22□□□□□ -0.29
TPM1-230ENST00000561266 KCNMB2Q9Y691 235 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 BOD1L1Q8NFC6 3051 aa13.22□□□□□ -0.29
TPM1-230ENST00000561266 A0A1W2PPM1 405 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 TRBC2A0A5B9 178 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 PABPN1LA6NDY0 278 aaKnown RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 VSTM2BA6NLU5 285 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 K7EM74 188 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 KLK8O60259 260 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 STK16O75716 305 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 DNAJB5O75953 348 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 TBX6O95947 436 aaPredicted RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 SNRPAP09012 282 aaKnown RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 C1GALT1C1LP0DN25 315 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 EMP3P54852 163 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 MAT1AQ00266 395 aaKnown RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 CDC16Q13042 620 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 ACAP2Q15057 778 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 ERCC6LQ2NKX8 1250 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 MUM1Q2TAK8 710 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 VWA2Q5GFL6 755 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 YOD1Q5VVQ6 348 aaPredicted RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 TMEM214Q6NUQ4 689 aaKnown RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 VN1R5Q7Z5H4 357 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 PDSS2Q86YH6 399 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 OR9A4Q8NGU2 314 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 RHEBL1Q8TAI7 183 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 ZCCHC10Q8TBK6 192 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 CREB3L4Q8TEY5 395 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 RERGQ96A58 199 aaPredicted RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 CD244Q9BZW8 370 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 KLHL31Q9H511 634 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 SOX17Q9H6I2 414 aaPredicted RBP13.21□□□□□ -0.29
TPM1-230ENST00000561266 PELI2Q9HAT8 420 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 ZNF304Q9HCX3 659 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 DNAJC11Q9NVH1 559 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 NUDT4Q9NZJ9 180 aa13.21□□□□□ -0.29
TPM1-230ENST00000561266 ZNF490Q9ULM2 529 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms