RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 PLIN3O60664 434 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 KATNA1O75449 491 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 NTRK1P04629 796 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 KLK3P07288 261 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 RPS17P08708 135 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 IMPDH1P20839 514 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 ATP5F1P24539 256 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 STAT5AP42229 794 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 SCTRP47872 440 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PRKAA2P54646 552 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 VSX2P58304 361 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 NAA20P61599 178 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 HERVK_113P63132 956 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 GPS2Q13227 327 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PWP1Q13610 501 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 FAM53BQ14153 422 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 DOC2AQ14183 400 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CASP8Q14790 479 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 KRT71Q3SY84 523 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 FBXO48Q5FWF7 155 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 VN1R4Q7Z5H5 301 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 ADCK2Q7Z695 626 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 TMPRSS11BQ86T26 416 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CACNA2D3Q8IZS8 1091 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 TBC1D19Q8N5T2 526 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PTGR2Q8N8N7 351 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 CAMKVQ8NCB2 501 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 GALNT6Q8NCL4 622 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 TRPV3Q8NET8 790 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 KCNE4Q8WWG9 221 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 RERGQ96A58 199 aaPredicted RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 L3HYPDHQ96EM0 354 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 MVB12AQ96EY5 273 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PTCD3Q96EY7 689 aaKnown RBP9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 APOPT1Q96IL0 206 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 NDC1Q9BTX1 674 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 EFCAB11Q9BUY7 163 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 NTMT1Q9BV86 223 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 ERVK-6Q9BXR3 956 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 SPNS1Q9H2V7 528 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 RHBGQ9H310 441 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 LHX9Q9NQ69 397 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PCTPQ9UKL6 214 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 ZMIZ1Q9ULJ6 1067 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PLLPQ9Y342 182 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 PCDHGA6Q9Y5G7 932 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 ACTL7BQ9Y614 415 aa9.19□□□□□ -0.94
RABGGTA-221ENST00000561055 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 A0A1B0GX78 115 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 FEZF1A0PJY2 475 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 HYKKA2RU49 373 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 LRRC14BA6NHZ5 514 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 OR1F1O43749 312 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 TYROBPO43914 113 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SIX3O95343 332 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 RECKO95980 971 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CAPN1P07384 714 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CD63P08962 238 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 RAB40ALP0C0E4 278 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CD22P20273 847 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 EEF1DP29692 281 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 BCL6P41182 706 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 HNF4AP41235 474 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ATP1A2P50993 1020 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 DNAJB13P59910 316 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 MEF2AQ02078 507 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 IRF8Q02556 426 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CHIT1Q13231 466 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 GTF2H2Q13888 395 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 TGIF1Q15583 401 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 MUM1Q2TAK8 710 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CRTC2Q53ET0 693 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 PAGE2BQ5JRK9 111 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF678Q5SXM1 525 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CEP85LQ5SZL2 805 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 PRAMEF17Q5VTA0 474 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 LIPJQ5W064 366 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 GRHL2Q6ISB3 625 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 GTF2H2CQ6P1K8 395 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 PRMT9Q6P2P2 845 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 TMIGD1Q6UXZ0 262 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZYG11AQ6WRX3 759 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 EXOC3L1Q86VI1 746 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 PLD3Q8IV08 490 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SPACA3Q8IXA5 215 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SRRM1Q8IYB3 904 aaKnown RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 LAS2Q8IYD9 372 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 C4orf33Q8N1A6 199 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 KRT78Q8N1N4 520 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 TEX9Q8N6V9 391 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF655Q8N720 491 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 CSNK1A1LQ8N752 337 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 SNX31Q8N9S9 440 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ANKRD53Q8N9V6 530 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 L3MBTL4Q8NA19 623 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 TTC29Q8NA56 475 aaPredicted RBP9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 ZNF740Q8NDX6 193 aa9.18□□□□□ -0.94
RABGGTA-221ENST00000561055 TTLQ8NG68 377 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms