RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PLPP5Q8NEB5 264 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 OR9A4Q8NGU2 314 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 FAM57AQ8TBR7 257 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 FOXC2Q99958 501 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 ETNK1Q9HBU6 452 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 FAM114A2Q9NRY5 505 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 KCNN3Q9UGI6 736 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 TAC3Q9UHF0 121 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 TFR2Q9UP52 801 aa17.46■□□□□ 0.39
TPM1-226ENST00000560959 KCNE1BA0A087WTH5 132 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 H3BMM5 538 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 P2RX6O15547 441 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 NME2P1O60361 137 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 PSIP1O75475 530 aaKnown RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 IL10P22301 178 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 NME2P22392 152 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 HRH2P25021 359 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 CHRNB4P30926 498 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 DNAJA1P31689 397 aaKnown RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 BCL6P41182 706 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 GRIA1P42261 906 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 PNLIPRP1P54315 467 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 HSF1Q00613 529 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 MAPKAPK3Q16644 382 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 PCID2Q5JVF3 399 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 RNFT1Q5M7Z0 435 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 MFSD4BQ5TF39 518 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 C3P1Q6ZMU1 363 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 CHDHQ8NE62 594 aaPredicted RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 PPHLN1Q8NEY8 458 aaKnown RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 NINJ1Q92982 152 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 BIRC8Q96P09 236 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 LPAR4Q99677 370 aa17.45■□□□□ 0.38
TPM1-226ENST00000560959 R3HDM2Q9Y2K5 976 aaKnown RBP17.45■□□□□ 0.38
TPM1-226ENST00000560959 ARHGEF33A8MVX0 844 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 E7ENX8 843 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 KIF5CO60282 957 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 MAN1A2O60476 641 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 SLC25A12O75746 678 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 PTMAP06454 111 aaKnown RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 HOXD4P09016 255 aaPredicted RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 MSX1P28360 303 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 PTGS2P35354 604 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 XCR1P46094 333 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 ADARP55265 1226 aaKnown RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 TAP2Q03519 686 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 ACTN3Q08043 901 aaPredicted RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 CTSL3PQ5NE16 218 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 PAPD4Q6PIY7 484 aaKnown RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 TGIF2LYQ8IUE0 185 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 TAB3Q8N5C8 712 aaPredicted RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 FBXO15Q8NCQ5 510 aaPredicted RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 ELP5Q8TE02 316 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 THAP11Q96EK4 314 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 PANX2Q96RD6 677 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 ZNF559Q9BR84 538 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 KCNJ16Q9NPI9 418 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 NPDC1Q9NQX5 325 aaPredicted RBP17.44■□□□□ 0.38
TPM1-226ENST00000560959 CHRAC1Q9NRG0 131 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 TREX1Q9NSU2 369 aa17.44■□□□□ 0.38
TPM1-226ENST00000560959 BTNL10A8MVZ5 291 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 E7EVH7 732 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 HAT1O14929 419 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 TOXO94900 526 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 CATP04040 527 aaKnown RBP17.43■□□□□ 0.38
TPM1-226ENST00000560959 CYB561P49447 251 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 IST1P53990 364 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 MPP1Q00013 466 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 USP10Q14694 798 aaKnown RBP17.43■□□□□ 0.38
TPM1-226ENST00000560959 SFT2D3Q587I9 215 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 TMEM214Q6NUQ4 689 aaKnown RBP17.43■□□□□ 0.38
TPM1-226ENST00000560959 RPS19BP1Q86WX3 136 aaKnown RBP17.43■□□□□ 0.38
TPM1-226ENST00000560959 PKP4Q99569 1192 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 CDCP1Q9H5V8 836 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 TMEM184CQ9NVA4 438 aa17.43■□□□□ 0.38
TPM1-226ENST00000560959 ANKHD1Q8IWZ3 2542 aaKnown RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 MAGEB17A8MXT2 336 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 NDC80O14777 642 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 PFDN6O15212 129 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 ZNHIT1O43257 154 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 SLC16A8O95907 504 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 ESR1P03372 595 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 TRHRP34981 398 aaPredicted RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 EIF3BP55884 814 aaKnown RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 SLC26A5P58743 744 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 RPS15AP62244 130 aaKnown RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 SNRPNP63162 240 aaKnown RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 NSDHLQ15738 373 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 RNF187Q5TA31 235 aaPredicted RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 ADCK2Q7Z695 626 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 SDCCAG8Q86SQ7 713 aaPredicted RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 MARVELD2Q8N4S9 558 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 CPSF7Q8N684 471 aaKnown RBP17.42■□□□□ 0.38
TPM1-226ENST00000560959 ZNF480Q8WV37 535 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 RND1Q92730 232 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 TMEM125Q96AQ2 219 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 OR1F2PQ96R84 312 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms